Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00993 CAATCAAGCTTGCCCCCTCCACCCCTGAGCTTGGTGTTGGAAGGGTCAGCATGAGGAAAACAGCCTCCAAGGCTGCTTCTTCAGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACCTGGGCCCATTCTCTGGTGAGGCCCCATCCTACCTGACTGGTGAATTCCTGGTGACTATGGTTGGGACACAGCTGGGCTTTCTGCTGACCCAGAGACTTTTGCCAAAACCTGATCCACAGCAGATGGGCCATGTTGGGAGCCTTGGGCTGTGTGTTCCCAGAGCTCTTGGCCCTGCAATGGTGTCAATGTGGTTCAAGGCAGGGTCCCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCACAAAGCATCCTTGCCATATGGGCCTCCCAAGTAATCTTGATGGGTGCTGTAGAGGGTTACCGTATTGCTGGTGGGCCTCTTGGTGAGGTGACAGACCCACTCTACCCAGGTGGGAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGATGCCTTTGCTGAGTTGAAGGTGAAAGAAATCAAGAATGGTAGGTTGGCCATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTCACTGGAAAGGGACCTTTGGAGAATCTTGCTGATCACCTTGCTGACCCTGTCAACAACAATGCTTGGGCCTATGCCACTAACTTTCTTGCCCCCTCCACCCCTGAGCTTGGTGTTGGAAGGGTCAGCATGAGGAAAACAGCCTCCAAGGCTGCTTCTTCAGGAAGCCCATGGTACGGCCCAGACCGTGTTAAGTACCTGGGCCCATTCTCTGGTGAGGCCCCATCCTACCTGACTGGTGAATTCCCTGGTGACTATGGTTGGGACACAGCTGGGCTTTCTGCTGACCCAGAGACTTTTGCCAAAAACCGTGAACTTGAAGTGATCCACAGCAGATGGGCCATGTTGGGAGCCTTGGGCTGTGTGTTCCCAGAGCTCTTGGCCCGCAATGGTGTCAAGTTTGGGGAGGCAGTGTGGTTCAAGGCAGGGTCCCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCACAAAGCATCCTTGCCATATGGGCCTCCCAAGTAATCTTGATGGGTGCTGTAGAGGGTTACCGTATTGCTGGTGGGCCTCTTGGTGAGGTGACAGACCCACTCTACCCAGGTGGGAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGATGCCTTTGCTGAGTTGAAGGTGAAAGAAATCAAGAATGGTAGGTTGGCCATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTCACTGGAAAGGGACCTTTGGAGAATCTTGCTGATCACCTTGCTGACCCTGTCAACAACAATGCTTGGGCCTATGCCACTAACTTTGTTCCCGGAAAG 1439 0.5316 MRKTASKAASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFLVTMVGTQLGFLLTQRLLPKPDPQQMGHVGSLGLCVPRALGPAMVSMWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFLAPSTPELGVGRVSMRKTASKAASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00993 463 FunFam Chlorophyll a-b binding protein 3A, chloroplastic 105 215 - -
Pste9g00993 463 Gene3D Chlorophyll a/b binding protein domain 65 215 - -
Pste9g00993 463 Gene3D Chlorophyll a/b binding protein domain 254 456 - -
Pste9g00993 463 SUPERFAMILY Chlorophyll a-b binding protein 14 218 - -
Pste9g00993 463 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 229 463 IPR001344 GO:0009765|GO:0016020
Pste9g00993 463 Pfam Chlorophyll A-B binding protein 68 188 IPR022796 -
Pste9g00993 463 Pfam Chlorophyll A-B binding protein 263 429 IPR022796 -
Pste9g00993 463 SUPERFAMILY Chlorophyll a-b binding protein 246 460 - -
Pste9g00993 463 FunFam Chlorophyll a-b binding protein, chloroplastic 254 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00993 Pste-Chr9 6439860 6446927 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00993 219 463 Chloroplast and Mitochondria Gene Families AT1G29910 88.306 7.72e-157 443