Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00897 ATGGAAGATTCAGAGGAAGAAGAGCTTTTGAATCTTACTCTTTCTGTTGCTGCTGGTAGGGAGAGGGAAAAAAAAGGAAGGAGAAGGGATAATAGTGATACTAATTATTCTATTCCTATGAAGTCCAATGACGGCTATGAAGGGAAGATTTTTATGCTCCTCCAAATGAGGGAGATGATGCTAAGAAAAGATCACAGAAGAAAAGGAGTGGTTGAAGATGGGAATAATAATGGTCTTTCTTTAATTCACTTGCTTCTCTCAACTGCTACTGCTGTTGATGGAAGAAACTATTGTGCAGCTCTTGAGAATCTTATTGACTTGTATCAAACAGTTTCTTTAACAGGTGACTCAGTTCAAAGGGTTGTGGCCTATTTTGCTGATGGTTTGGCTGCAAGGCTTCTAACAAGGAAGTCCCCTTTCTATGACATGCTCATGGAGGAACCAACAAGTGAGGAAGAGTTTCTTGCATTCACAGATCTCTATAGAGTCTCACCCTATTACCAATTTGCTCACTTCACAGCAAACCAGGCTATTTTGGAGGCATATGAGGAGGAGGAAGAGAGGAACAACAAAGCACTTCATGTCATTGATTTTGATGTGTCCTATGGTTTCCAATGGCCTTCTCTTATTCAATCACTTTCTGAAAAGGCAACAAGTGGCAACAGAATATCCCTTAGGATAACAGGTTTTGGGAACAGCTTAAAAGAATTGCAAGAAACTGAGGCAAGGTTGGTTAGCTTCTCAAAGGGGTTTGGTAACCATCTTGTGTTTGAGTTCCAAGGGTTGCTAAGAGGCTCATCAAGGATCATCAACTTAAGGAAACAGAAAAATGAAACTGTGGCAGTAAACCTTGTTTCTTATTTGAACACTTTGAGTAGTTTCATGAAGGTCTCTGACACATTGGGATTTGTTCATTCTCTTAGCCCCTCCATTGTGGTGTTGGTGAAACAAGAAGGTAGCAGGAGTGTTAAGACCTTCTTGTCAAGGTTCACTGAGTCTTTGCACTACTTTGCAGCTATGTTTGATTCACTGGATGATTGCTTGCCTCTTGAGAGCACCGAGAGGTTGAGGATTGAGAAGAAGCTTTTGGGGAAAGAGATCAAAAGCATGCTCAACTACGACATGGATGGTGTGGATTGCCCAAAATATGAAAAGATGGAAACATGGAAAGCAAGAATGGAGAATCACGGCTTTGTTGGAAGAAAAATAAGCTCAAAGGGTTTGATCCAAGCAAAGTTGCTTTTGAAGATGAGGACTCATTATTATCCACTACAGCTTGAGGAAGAGGGTGGTGGGGGTTTCAAAGTTTCTGAAAGGTATGAAGGAAGTGTTATCTCTTTGGGGTGGCAAAATAGGTTTCTTCTCACTGTCTCAGCATGGCAACAAACCAGTTTGACACAATAG 1404 0.4103 MEDSEEEELLNLTLSVAAGREREKKGRRRDNSDTNYSIPMKSNDGYEGKIFMLLQMREMMLRKDHRRKGVVEDGNNNGLSLIHLLLSTATAVDGRNYCAALENLIDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAYEEEEERNNKALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGNSLKELQETEARLVSFSKGFGNHLVFEFQGLLRGSSRIINLRKQKNETVAVNLVSYLNTLSSFMKVSDTLGFVHSLSPSIVVLVKQEGSRSVKTFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGVDCPKYEKMETWKARMENHGFVGRKISSKGLIQAKLLLKMRTHYYPLQLEEEGGGGFKVSERYEGSVISLGWQNRFLLTVSAWQQTSLTQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00897 467 Pfam GRAS domain family 81 461 IPR005202 -
Pste9g00897 467 MobiDBLite consensus disorder prediction 20 34 - -
Pste9g00897 467 MobiDBLite consensus disorder prediction 20 39 - -
Pste9g00897 467 ProSiteProfiles GRAS family profile. 72 461 IPR005202 -
Pste9g00897 467 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 67 456 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00897 Pste-Chr9 5016505 5017908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00897 67 461 GRAS Transcription Factor Family AT1G14920 34.069 5.91e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste9g00897 GRAS 6e-89 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g00897 9 5016505 5017908 Pste9g00897 9 5016505 5017908 ECH