Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00888 CCTTTTTCTATGTTCTTCTCTTCAGCCTTAATCCAGATCAAATAAAATACTCACTCACACACCCCAAATAGATTACACATATAAAAGTTAAGGATAGTCTCAGTTCAAAACTCTACTAAGAACATGGGCAGGTATGAGTATATCCCCACATCTTTCCTTAGTGTTTTGTTCTTCTTTTGTTTCTGTCCTATGGTGTTGTCTCTATCTCAAAACCAAACACAAAACATGAACAACATCTCAATGCAACTTTCTCCTCCTGTTCCATGGAATGGCTCAGAACCATGTGCATGGAAAGGAGTCACTTGTGACAATACCAATTCTTCTGTAATAAGCATTTCTTTATCTGGGTATTCTCTCCTGTCTTCTGAGTTTCTGCCTCTTGTATGCAAAATTGAAACTTTGGAGCATCTTGATATCTCCAACAATCGTCTGAGCTCAATCCCAGATGATTTTGTCAGTGAATGTGGAAAGATAAAGGGGTTGAAAATGCTGAATTTCAGTGGAAACAAGCTAGGAGGTTCTTTACCAACTTTTCTAGGTTTTGATGCATTGGAATCCCTGGATATGTCTTTCAATATGTTAGCAGGGATTATTGGCTTAGAGTTAGATGGATTGGTTAGCCTCAAAAGTTTGAATCTTAGTTCCAATAAATTCTCTGGGTCTCTTCCTACCAAATTGGGAAAGTCCATGATTTTGGAGCGGCTTGTACTTTCTACCAATCAGTTTGATGGAAAAATCCCTGATGAATTATTAAGTTATAAAAACTTGACTTTGATTGATCTTAAGGCCAATTCTCTTTCAGAGTCCATTCCTAAAATTATTGGGAACCTTTCTAAATTGGAAACTTTGATCCTTTCCTCTAATCTCCTCGTTGGTGAAATTCCAACATCACTTATGGACATCACAACACTTTCAAGATTTGCAGCTAATCTGAACAAATTTACAGGTCCTGTACCTCCTGGTATTACAAAATATGTCAAAAGTTTGGATCTTAGTTTTAATCATCTCTCTGGAACCATTCCAGAAGACCTCTTATCCCCGTCACAGTTGGAGGTTCTAGATTTGTCCAACAATAATTTATTTGGGCCATTACCTTCAAAAGTTTCTCCAAAATTGTTCAGGTTGAGGTTTGGGAACAATAATCTGAGTGGAAGCATTCCTTCTGATGCTTTTCGATCAGTTATGAATTTGACATACTTGGAGCTGGATAATAATGGCCTGAACGGATCTATACCAGCTGAATTGGGTTCTTGCAAGAGTTTGGCACTGTTGAATTTAGCCCAGAACCAGTTGAGTGGTGAATTGCCACCTCAGCTTGGTAATCTTAGCAATCTTCAAGTCTTGAAGCTTCAATCGAACAAGCTTATTGGTGCAATCCCAACTGAAATTGGCCAACTTCATAAGTTGTCAACGCTGAATTTGAGCCAGAATTCTCTGGGTGGATCTATTCCTTCTGAGATAACAAGTTTAGGCAGTCTTAATTTCTTGTACTTGCAAAGCAACAATTTGAGTGGTTCCATACCAGCATTCATTAACAAATTGAGATATCTTTTAGAACTCCAACTTGGGAAAAACCAGCTAACTGGTATCATACCAAGCATGCCATTGAGTCTGCAGGTTTCCTTGAATCTTGGTAGTAACCTCTTTCGTGGTCCTATACCTAGCAGTTTTAGTAGTTTGAGTAGCCTGGAAATCTTGGATCTCTCAAATAACTTTTTTTCTGGTCCAATTCCTAGTGATCTGACTGAAATGTCAGCTTTGACTCAGTTGATACTTTCTAACAATTCTCTGTCTGGTGAAATCCCAAAATTCACTCAAAATATCTATGTTGAATATTCTGGAACTGATCTGAAAAATACTACTACACAAGACAACCAAATAGTCCAGAGTCGCTCTAAAAAGGGAATATCTGTTGCTGTGGCAATTCTCATTGCAATTGTAGCAGCTATTGTTCTTGTCGGCCTTGTCACCCTGCTGATTGTGTCAGTGTCACGACACTATTACAGGGTTAATGACGAGCATTTGCAGGCACAAGAAGATCATCAGAATCCTCAGGTCATCCAAAGTAATTTATTAACTCCTAATGGAATACACAGATCAAGCATTGACTTCTCCAAAGCCATGGAAGCTGTTGCTGAAACAGCAAATGTCACTCTGAAAACAAGGTTTTCAACTTATTACAAGGCTATCATGCCATCTGGATCAATCTATTTTGTCAAGAAACTGAACTGGTCTGACAAGATATTGCCGGTGGGAAGTCATGATAAATTTGGAAAAGAGCTAGAAGTCTTGGCAAAATTGAACAATTCAAATGTCATGACTCCTTTGGCCTATGTTCTGTCCACTGATACGGCTTATATACTATATGAGTTTATCTCAAATGGTTCCCTCTTTGATGTTCTTCATGGAAGCATGGCCCCCACTTTAGATTGGGCTAGCAGATACAGTATTGCAGTTGGAGTGGCTCAAGGACTTTCTTTTCTGCATGGATTTTCCTCCGGTCCAATACTACTCCTTGACCTATCAAGTAAAAGTATTATGTTGAAGTCCCTCAAGGAGCCTCTAGTTGGGGATATTGAACACTACAAGGTGATTGATCCCTCAAAGAGTACAGGGAATTTTTCCGCGGTTGCTGGTTCAGTTGGTTATATTCCTCCAGAGTACGCATACACAATGACAGTAACTATGGCTGGGAATGTCTACAGTTTCGGTGTCATTCTTCTTGAACTGCTGACAGGAAAACCTGCAGTGACCGAGGGAACAGAATTGGTCAAATGGGTTTTGCGTAGTTCAGCAAACCAAGATTACATTCTTGATTTTAATGTCAGTAGAACATCACAAGCAGTTAGAAATCAGATGCTTGCAATTCTTGAGATTGCTCGTGTTTGTGTTAGTACATCCCCAGAATCAAGACCAAAAATGAAGAGTGTGCTTCGGATGCTCTTAAATGCTAGATAGAGTCAGATTCTTCAGGGTTGGAATGAAATATTTAAGGGATATTTACTTGGGAGGTGATAAGTCTAGGAAATATGCAGGTAGAATATATATAGGATGTTTTGCTCAAAATAGTAATACTTCTATGGTGTGTCAACAATGTGCAGTATATACCAGTTTACTAGTAGTAAACACTAGACATGTAGCTCATACACATAATATTTGGATGTCTTATTCTTGTTGAAGAAGAGTTAGCAAACTTGTTAGCTCATTAATGTTCCCATTTTAACTTATCTTACAAGAATAGACTAAATTGATATGCACAAGAAGACTAAATGACAGTATTGCTTGCAATCAGAAAATTAGAATCCTTTGACTCCCAG 3317 0.3841 MGRYEYIPTSFLSVLFFFCFCPMVLSLSQNQTQNMNNISMQLSPPVPWNGSEPCAWKGVTCDNTNSSVISISLSGYSLLSSEFLPLVCKIETLEHLDISNNRLSSIPDDFVSECGKIKGLKMLNFSGNKLGGSLPTFLGFDALESLDMSFNMLAGIIGLELDGLVSLKSLNLSSNKFSGSLPTKLGKSMILERLVLSTNQFDGKIPDELLSYKNLTLIDLKANSLSESIPKIIGNLSKLETLILSSNLLVGEIPTSLMDITTLSRFAANLNKFTGPVPPGITKYVKSLDLSFNHLSGTIPEDLLSPSQLEVLDLSNNNLFGPLPSKVSPKLFRLRFGNNNLSGSIPSDAFRSVMNLTYLELDNNGLNGSIPAELGSCKSLALLNLAQNQLSGELPPQLGNLSNLQVLKLQSNKLIGAIPTEIGQLHKLSTLNLSQNSLGGSIPSEITSLGSLNFLYLQSNNLSGSIPAFINKLRYLLELQLGKNQLTGIIPSMPLSLQVSLNLGSNLFRGPIPSSFSSLSSLEILDLSNNFFSGPIPSDLTEMSALTQLILSNNSLSGEIPKFTQNIYVEYSGTDLKNTTTQDNQIVQSRSKKGISVAVAILIAIVAAIVLVGLVTLLIVSVSRHYYRVNDEHLQAQEDHQNPQVIQSNLLTPNGIHRSSIDFSKAMEAVAETANVTLKTRFSTYYKAIMPSGSIYFVKKLNWSDKILPVGSHDKFGKELEVLAKLNNSNVMTPLAYVLSTDTAYILYEFISNGSLFDVLHGSMAPTLDWASRYSIAVGVAQGLSFLHGFSSGPILLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGNFSAVAGSVGYIPPEYAYTMTVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVLRSSANQDYILDFNVSRTSQAVRNQMLAILEIARVCVSTSPESRPKMKSVLRMLLNAR 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00888 944 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 29 183 - -
Pste9g00888 944 Gene3D Transferase(Phosphotransferase) domain 1 751 944 - -
Pste9g00888 944 Pfam Leucine Rich Repeat 308 324 IPR001611 GO:0005515
Pste9g00888 944 Gene3D Phosphorylase Kinase; domain 1 635 750 - -
Pste9g00888 944 PANTHER LEUCINE RICH REPEAT KINASE 2 66 208 - -
Pste9g00888 944 Pfam Leucine rich repeat 92 153 IPR001611 GO:0005515
Pste9g00888 944 Pfam Leucine rich repeat 402 462 IPR001611 GO:0005515
Pste9g00888 944 Pfam Leucine rich repeat 500 556 IPR001611 GO:0005515
Pste9g00888 944 SUPERFAMILY Protein kinase-like (PK-like) 682 940 IPR011009 -
Pste9g00888 944 PRINTS Leucine-rich repeat signature 93 106 - -
Pste9g00888 944 PRINTS Leucine-rich repeat signature 425 438 - -
Pste9g00888 944 Gene3D Ribonuclease Inhibitor 24 185 IPR032675 -
Pste9g00888 944 Gene3D Ribonuclease Inhibitor 283 586 IPR032675 -
Pste9g00888 944 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 639 750 - -
Pste9g00888 944 ProSiteProfiles Leucine-rich repeat profile. 92 113 IPR001611 GO:0005515
Pste9g00888 944 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 326 574 - -
Pste9g00888 944 FunFam leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 751 944 - -
Pste9g00888 944 SMART LRR_typ_2 519 543 IPR003591 -
Pste9g00888 944 SMART LRR_typ_2 307 334 IPR003591 -
Pste9g00888 944 SMART LRR_typ_2 90 112 IPR003591 -
Pste9g00888 944 SMART LRR_typ_2 164 188 IPR003591 -
Pste9g00888 944 SMART LRR_typ_2 236 260 IPR003591 -
Pste9g00888 944 SMART LRR_typ_2 449 473 IPR003591 -
Pste9g00888 944 SMART LRR_typ_2 401 425 IPR003591 -
Pste9g00888 944 SMART LRR_typ_2 353 377 IPR003591 -
Pste9g00888 944 SUPERFAMILY RNI-like 252 563 - -
Pste9g00888 944 SUPERFAMILY L domain-like 28 324 - -
Pste9g00888 944 ProSiteProfiles Protein kinase domain profile. 671 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00888 944 Pfam Protein kinase domain 682 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00888 944 Gene3D Ribonuclease Inhibitor 186 282 IPR032675 -
Pste9g00888 944 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 184 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00888 Pste-Chr9 4921781 4925773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00888 120 940 Receptor kinase-like Gene Family AT2G41820 36.972 3.99e-150 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste9g00888 Pkinase 6.3e-22 CL0016