Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00874 AAGAAAACTGATTCCTTGAAATGGAAGGGAAGTAGCTAAAATTCAAAAACCTCAGGAAGTAGTAAGATAGATAATAGTGAGAAGAAAATGACAAAATAATAAATAAGCAACACAAAAATGTAAATGAATGGAAGAGAGGTGGTGGTGTAGTGAAAGTGAGGTCAGGGTCGGTGAAAGCCAAACAAAAAGTTTGTTGCTATTATTGTTTTGGTTTTGTTTTTCAGTGTCAAATTACACTAATCAAACGTTCTAACCACACTCCATCAACACCATATATACCCTTCTCCTCTCACACTAATTAACACACATCAAAACAAGCCTTCTTTCTTTTTCTGAGCCTTTCTTTCAGGTTCTTCTTTACTTGATCATTGTGCTGTGTCAAAACCAAAAAGGTGTTGCAAATTGCAATGGCTAAGCATGATGTTGAGGTTGCTGAGCGTGGTTCCTTCTCTGGCAAGGACTACCATGACCCTCCTCCAGCTCCTTTGATTGATGCTGAGGAACTCACACAATGGTCCTTCTACAGGGCCTTGATTGCTGAGTTCATTGCCACACTGCTCTTTCTTTACATCACTGTGTTGACTGTGATTGGTTACAAGAGCCAGAGTGATGTGAAGGCTGGGGGTGATGTGTGTGGTGGTGTTGGCATTCTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCATTCTTGTTTACTGCACTGCTGGAATCTCAGGGGGTCACATTAACCCAGCAGTGACATTTGGACTTTTCTTAGCTCGCAAGGTGTCTTTGATTAGAGCTATAATGTACATGGTGGCTCAGTGTTTGGGTGCCATATGTGGAGTTGGGTTGGTTAAGGCCTTCCAAAAGGCTTACTACAACGGGTATGGTGGTGGGGCCAATGAGCTCAGTGAAGGGTACAGCACAGGTGTTGGATTGGGTGCAGAGATAATTGGAACCTTTGTTTTGGTCTACACTGTGTTTTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAACCATCCCAGTCACTGGAACTGGTATTAACCCTGCTAGGAGTCTTGGAGCTGCTGTCATGTACAACAAACAGAAGGCCTGGGATGACCATGTACTTCACTTGATCAGTGTGTGGTGTCAAATTGCAATGGCTAAGAATGATGTTGAGGTTGGTGAGCATGGTTCCTTCTCTGCAAAGGACTACCAGGACCCTCCTCCAGCTCCTTTGATTGATGCTGAGGAACTCACACAATGGTCCTTCTATAGGGCTGTGATTGCTGAGTTCATAGCCACACTGCTCTTCCTTTACATCACAGTGTTGACAGTGATTGGTTACAAGAGCCAGAGTGATGTGAAGGCTGGGGGTGATGTGTGTGGTGGTGTTGGCATTCTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGAATCTCAGGGGGTCACATTAACCCAGCAGTGACATTTGGGCTGTTCTTGGCTCGCAAGGTGTCTTTGATTAGAGCTATAATGTACATGGTGGCTCAGTGTTTGGGAGCCATATGTGGAGTTGGGTTGGTTAAGGCCTTCCAAAAGGCTTACTACAATAAGTATGGTGGTGGGGCCAATGAGCTCAGTGAAGGGTACAGCACTGGTGTTGGATTGGGTGCAGAAATCGTTGGAACCTTTGTTTTGGTGTACACTGTGTTTTCTGCAACTGACCCCAAGAGAAATGCTAGAGATTCTCATGTTCCGGTTTTGGCTCCACTTCCAATTGGTTTTGCTGTTTTCATGGTTCACCTGGCAACCATCCCAGTAACTGGCACTGGTATTAACCCTGCTAGGAGTCTTGGAGCTGCTGTCATGTACAACCAAAAGAAGGCCTGGGATGATCAATGGATCTTTTGGGTTGGACCATTTATTGGAGCAGCCATTGCAGCCTTCTACCACCAATTCATCTTGAGAGCAAGTGCTGCTAAGCCTCTTGGATCATTCAGGAGCAACCCCACATATTGAGTCAGTTTCCTCTTCAAAAGGGGTTAGTGGAAATGGAAAGAAGATAATTGGAAGCAAAATGAGTTGATATCAAAACAGTAATAATAATAATGGGAAGTGTTTGTGCTTTGATCCTCTTTAGGCTGAAGGTTCTTTCAAGACAAAGGAAGCCTTTGGAAGTAAAATCTCTTAGATATGTTGTTTTTATAGTATGGTATGTATTCAGGTTAGTAGTCAACATGTTGGTTAAGTTGGGTGAATACTTTGAGGTCTGGTTATGATAGGCCAATGTCACACTTTTTTGTTTGTGATATTTGAATATTCACCAAAACCAAGTCACTTGTATGTATGCAGAATGAAAATGTACTTTCATTCCACCATAGAAGCTTTGTGCTATGTTTTTCCTCTCTTCTATTTTTTTCTCTCTTCATGATATCAAGAATTTTATTGATTTTTAATGGTATTTGAATGTGAGAAAACCAAGTAGAAAA 2527 0.4298 MAKHDVEVAERGSFSGKDYHDPPPAPLIDAEELTQWSFYRALIAEFIATLLFLYITVLTVIGYKSQSDVKAGGDVCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQKAYYNGYGGGANELSEGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVMYNKQKAWDDHVLHLISVWCQIAMAKNDVEVGEHGSFSAKDYQDPPPAPLIDAEELTQWSFYRAVIAEFIATLLFLYITVLTVIGYKSQSDVKAGGDVCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQKAYYNKYGGGANELSEGYSTGVGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVMYNQKKAWDDQWIFWVGPFIGAAIAAFYHQFILRASAAKPLGSFRSNPTY 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00874 549 NCBIfam MIP family channel protein 44 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 NCBIfam MIP family channel protein 305 528 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 ProSitePatterns MIP family signature. 106 114 IPR022357 -
Pste9g00874 549 PRINTS Major intrinsic protein family signature 386 405 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 PRINTS Major intrinsic protein family signature 349 373 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 PRINTS Major intrinsic protein family signature 301 320 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 PRINTS Major intrinsic protein family signature 471 493 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 PRINTS Major intrinsic protein family signature 511 531 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 PRINTS Major intrinsic protein family signature 435 453 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 FunFam Probable aquaporin PIP1-2 25 269 - -
Pste9g00874 549 Pfam Major intrinsic protein 293 528 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 Pfam Major intrinsic protein 32 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 ProSitePatterns MIP family signature. 367 375 IPR022357 -
Pste9g00874 549 FunFam Probable aquaporin PIP1-2 286 547 - -
Pste9g00874 549 SUPERFAMILY Aquaporin-like 32 251 IPR023271 -
Pste9g00874 549 SUPERFAMILY Aquaporin-like 293 534 IPR023271 -
Pste9g00874 549 Gene3D Glycerol uptake facilitator protein. 286 549 IPR023271 -
Pste9g00874 549 Gene3D Glycerol uptake facilitator protein. 25 262 IPR023271 -
Pste9g00874 549 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 270 543 IPR034294 -
Pste9g00874 549 CDD MIP 40 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste9g00874 549 CDD MIP 301 531 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00874 Pste-Chr9 4714858 4727924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00874 260 545 Major Intrinsic Protein MIP AT2G37170 83.916 1.03e-173 492