Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00867 GTTTGTCTACCCTAAAACATGGACGAGGATCAAGAGATGGAGAGGTTTGGAATGGAGAATGATTATGAGGGTGTGGATTGGTGATGAGTTTTACTATAAGAGTCGTAAAGAAAAACGCATTCAGACCAAGGATGATATCCTTTATGGAGTTTTTGCAGATTCTGATGACAATGATGATGATGATTATCCCAGCAGAAAACGGAGGAAAGACCGTGATTTTTCAAAGAAGCCAGACCTCACCAAGCCTGTAAATTTTGTGTCTACTGGAACTTTTATGCCTAATCAAGAAATTGATAACAAGTCCAAAGAGCAGGATGAGAAAGACGATTATGCTAGTGAGGATAGGCCAGGATTAGGCTTAGGTTTTGGAATGGGGTCTGGTTTAGGTTTTAATTCTGGTAAAGCTGTGAATGGTTCAGATAGAAATAATGATTCTGATGAGAATGATGATGATACTTTCTTGCCCACGGCGTTTGGTAAGAAGATTAAGGAGGGGGCTATGAGAAGGGAAAAGGAACGGGAGAGGGAGAAGTTGGAGAAGAAGAGGGGGAAGCATCAGAACATAGGTCAAGATGGGCTTGGTGATGTTGGGAAATTTGAGAAGCATACGAAGGGGATAGGGATGAGGCTGTTGGAGAAGATGGGTTATAAAGGAGGTGGGCTTGGGAAGAATGAGCAAGGTATTGTGGCTCCTATTGAGGCAAAATTGAGGGCCAAGAATTCTGGCATTGGGTTTAATGAGTCTAAGGAGAGTATGCCATTACCTGTTTTGCAACAAGAGAAAAAGAATGTGCCAGAAGTTACCCAACCTGTGGTTGGCCGAACGAAGGAGAGGTCATGGTCAAAGCAAGCAAGGTTGAAGAAGAAAAAGGAGGAAGAATACATAACGGCTGAGAAGTTGTTGGCTAGCAAGCAAGAACAAGAATTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGTCCCCAGGTTCGGGTATTAACAAATTTGTCAGATTTGAATGCTGAGGAGAAAGCAAAAGAAAATGATGTCCCAATGCCAGAACTTCAGCACAATGTAGCATTAATAGTTAGGTTGGCTGAGGCGGACATCCAAGAGATTGACAGAGATTTGAGGAGAGAGAGGGAGACAGCACTGAGCTTGAAAAAAGAAAAAGAGAAGTTAGAAACTGAGGCTGCATTTCAAAAGAAGCAGCTTGATAGTATGGAGGAAATAATGAGGGTGTTGGACCGTGTTGCTGAAGAAAACACTTTGGGAACATTAACACTGGATTCCCTTGCTCAAAGCTTTAGGGACTTACGCAAGAGATGTGCTGATAACTACAAGTTGTGTAACTTGTCATGCATTGCTTGTTCATATGCTCTACCTCTGTTTATCAGAGTGTTCCAAGGATGGGATCCTCTTCGAAATCCGTCTCATGGTTTGGAATTGGTATCACAGTGGAAGGCATTACTTCAAGGGGAAGATTCTGTTGATATATGGGATATATCATCACCTTATACACAATTGGTTTCAGAGGTTGTATTGCCAGCTATTAGAATATCTGGTATCAATACCTGGCAGGCACGGGATCCTGAGCCAATGTTATGGTTTCTGGAATCATGGGAAAAGTTACTTCCTCCTTCAGTCCTTTCTACCATATTAGACAATATAGTCATGCCAAAACTATCAAGTGCTGTAGATACTTGGGAACCACATCGTGAGACCATTCCTATTCACACTTGGGTGCATCCATGGCTACCTCTTCTGGGGCACAAGTTGGAGGGTATTTACCAGGTGATTCGTTTTAAATTGAGTACTGTTCTTGGTGTCTGGCACCCTAGTGATGGCTCTGCTTATGCTATATTGTCTCCTTGGAAAACTGTATTTGATTCTGCGAGTTGGGAACAGCTTATGCTTCGTTTTATTGTACCAAAGTTGCAGCTTGTCTTGCAAGAGTTCCAACTGAACCCAGCAAATCAGAATCTTGATCAGTTTTATTGGGTAATGAACTGGGCTTCTGCTATTCCTATTCACCTTATGGTTGACATGATGGAGAAATTCTTCTTTGCCAAATGGCTTCAGGTTTTATATCATTGGTTGTGCTCAAATCCTAATTTTGAAGAAGTTACAAAATGGTATTTGGGATGGAAAGAACTCATTCCAAAAGAACTGCTGGCTAATGAAAGTATCCGATATCAGCTTAATCGGGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTGAAGGAGAATATAAGCTATCTTAGGGTACTTGAGCAAAGGCAATTTGAGGCTCAACAGAAAGCAGCAGCCTATGCTCAACAGCAAGCTGCTGCTAGCTTGGGTGGTGCAGTCAATGCAGATGGTGCACATGAATTGACCTTGAAAGAAGTCATTGAGGCTCATGCTCAGCAACATGGTTTGCTATTCAAGCTTAAACCTGGCAGAATGCATAATGGTCATCAAATATATGGGTTTGGTAATGTCAGCATTATAATAGACTCTCTTAATCAGAAGGTATATGCCCAAAATGAAGACATGTGGTCTTTGGAATCTCTTCAAGGCTTGCTAGAGTTGCATAATAAATCCCTTGCTCAAGATGTTGTGCTTTCTAAGCAGCATATAGTGTTTAGAAATCATGGTACTTCAGCTGGTGAATCAATGAGTCATTCTCACTGCCAGATGATGTTCCTGCCATTTATTCCACATAGTGTTTCTGCCCGTCTTGCAAGTATGAAAGATCATTTTGATCAGACAGGGAAATGTTTTATTTGTGAAATTCAACGCAAAGATCTTTTGATTGATTCCTCTACCAACTTCCTTTCACTGGTTCCTTTTGCTGCTACATTTCCTTTTGGGATATGGATTGTTGCTGGACAGTTGAATTTGGAGTTAAACATTCCACCGTTCAACTATATGATTCACATTAGTCCCCTTAATGGTAATGGGTTGGAGTTAACATGCACATTGATAAAATCTCTACTAATTGGGATTGTGAGCTTTGAGCTGGGAACTGAGTGTTGTATAAATCCTGTGTTCCCCGAGGATGCTGCAAAGGTT 3061 0.4152 MIMRVWIGDEFYYKSRKEKRIQTKDDILYGVFADSDDNDDDDYPSRKRRKDRDFSKKPDLTKPVNFVSTGTFMPNQEIDNKSKEQDEKDDYASEDRPGLGLGFGMGSGLGFNSGKAVNGSDRNNDSDENDDDTFLPTAFGKKIKEGAMRREKEREREKLEKKRGKHQNIGQDGLGDVGKFEKHTKGIGMRLLEKMGYKGGGLGKNEQGIVAPIEAKLRAKNSGIGFNESKESMPLPVLQQEKKNVPEVTQPVVGRTKERSWSKQARLKKKKEEEYITAEKLLASKQEQELEVVQKVYDMRGPQVRVLTNLSDLNAEEKAKENDVPMPELQHNVALIVRLAEADIQEIDRDLRRERETALSLKKEKEKLETEAAFQKKQLDSMEEIMRVLDRVAEENTLGTLTLDSLAQSFRDLRKRCADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWKALLQGEDSVDIWDISSPYTQLVSEVVLPAIRISGINTWQARDPEPMLWFLESWEKLLPPSVLSTILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGIYQVIRFKLSTVLGVWHPSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQLNPANQNLDQFYWVMNWASAIPIHLMVDMMEKFFFAKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAYAQQQAAASLGGAVNADGAHELTLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEDMWSLESLQGLLELHNKSLAQDVVLSKQHIVFRNHGTSAGESMSHSHCQMMFLPFIPHSVSARLASMKDHFDQTGKCFICEIQRKDLLIDSSTNFLSLVPFAATFPFGIWIVAGQLNLELNIPPFNYMIHISPLNGNGLELTCTLIKSLLIGIVSFELGTECCINPVFPEDAAKV 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00867 1001 MobiDBLite consensus disorder prediction 158 177 - -
Pste9g00867 1001 Pfam G-patch domain 184 225 IPR000467 GO:0003676
Pste9g00867 1001 Coils Coil 149 169 - -
Pste9g00867 1001 SUPERFAMILY HIT-like 883 1000 IPR036265 -
Pste9g00867 1001 MobiDBLite consensus disorder prediction 62 78 - -
Pste9g00867 1001 Pfam Tuftelin interacting protein N terminal 8 91 IPR022159 -
Pste9g00867 1001 Pfam GC-rich sequence DNA-binding factor-like protein 403 670 IPR022783 -
Pste9g00867 1001 Gene3D - 844 941 IPR036265 -
Pste9g00867 1001 Coils Coil 268 288 - -
Pste9g00867 1001 MobiDBLite consensus disorder prediction 79 95 - -
Pste9g00867 1001 MobiDBLite consensus disorder prediction 31 136 - -
Pste9g00867 1001 Coils Coil 337 385 - -
Pste9g00867 1001 ProSiteProfiles G-patch domain profile. 184 229 IPR000467 GO:0003676
Pste9g00867 1001 MobiDBLite consensus disorder prediction 40 59 - -
Pste9g00867 1001 SUPERFAMILY HIT-like 849 883 IPR036265 -
Pste9g00867 1001 SMART G-patch_5 182 227 IPR000467 GO:0003676
Pste9g00867 1001 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 17 836 IPR045211 GO:0000390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00867 Pste-Chr9 4634978 4639881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00867 184 228 C2H2 Transcription Factor Family AT5G26610 51.111 8.84e-08 53.1