LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste9g00860	TCTGATCCGAACCTCACCTTTGAACGCAGAAAGGGGATTAGGGTTTAGGAAGCTGTAATGGATTTCACTGCGGAGAAGAAGGAATCAGAGAACAACAACAGCAATAACCCTGAAAATCTTCATCAACCGTTAAATTCTTCTTCTCAATTGGCATCGGTACTCGATTCCAACAACAACAAAGAAATCGAAGAACGACAAGCTCGTGAACTCAAAGCCGGTCTTCATCCCCTAAAGGAAGGTTTGATTGAATGCTGTGGTTGGCAGTTCTTATTTGAAGCAGTTATATCAGAGAGGGTGTTAGTGGAGCTAGATATTTTGGTTGATTTCTTTTGTGTTTGTGGTGATTTATTTGAGCAGCACAAGTTTGTCTTCTGGTACACACGTCGAACACCAGGAGTTCGAAATCAAACATCATACGAGGACAACATAAAGAAAATTGTTGAATTCAGTACGGTTGAAGGATTTTGGGTCTGTTATTGCCATCTTACTCGTCCATCTTGTTTGCCTAGTCCAACCGATTTGCACCTTTTCAAGGAAGGAATCCGTCCTTTATGGGAGGACTCTGCTAACTGTAGTGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTTTCAGGTCGTTTTTGGGAGGACCTGGTTCTTGCCTTAGTGGGTGACCAATTGGATTATGGGGATAACATATGCGGAGCAGTACTAAGCATCCGTTTCAACGAGGATATATTGAGTGTCTGGAATCGCAACGCCTCTGACCATCAGGCTGTAATGGCTCTGAGAGATTCAATCAAACGCCACTTAAAGCTTCCTCACAGCTATGTTATGGAGTATAAGCCCCATGACGCCTCTCTGCGAGACAATTCATCTTACAGGAACACTTGGTTGAGAGGCTAGAGATGCAGACGTGTTCTTGCGGGAGTCCCCGCCTTCCAGAAGCTAATATTGCATACTGGTTCAGCTTTCACTCAACCAGTTTATCAGTAGGAACACTCTAATGATGGAGCTGTGTGTTCCAGGACTGGTTTCTGTCTTTTGAATTCAATGTACGACAGCTACATTGCTACTGCTTTAAATAGTTTCATTTGGTTACTTGGCTTCAGTCTAATTTTGTGTAATGTGTCTCTTAGTTGTAAATAAACCTGCTCGTGATGTTGCTTTTAATCTCGCTGATGGAGAGAGTCATAGCTTTCTCTCCCATATGATAGATTGTAGATTACTTTTGTAGGGTATTTTTACATAAAGGCATTAATAAATTTCTTTAAAACTGAAGTATACTAG	1272	0.4143	MDFTAEKKESENNNSNNPENLHQPLNSSSQLASVLDSNNNKEIEERQARELKAGLHPLKEGLIECCGWQFLFEAVISERVLVELDILVDFFCVCGDLFEQHKFVFWYTRRTPGVRNQTSYEDNIKKIVEFSTVEGFWVCYCHLTRPSCLPSPTDLHLFKEGIRPLWEDSANCSGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG	276

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste9g00860	276	Pfam	Eukaryotic initiation factor 4E	100	256	IPR001040	GO:0003723\|GO:0003743\|GO:0006413
	Pste9g00860	276	MobiDBLite	consensus disorder prediction	1	26	-	-
	Pste9g00860	276	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED	21	265	IPR001040	GO:0003723\|GO:0003743\|GO:0006413
	Pste9g00860	276	SUPERFAMILY	eIF4e-like	100	272	IPR023398	-
	Pste9g00860	276	ProSitePatterns	Eukaryotic initiation factor 4E signature.	154	177	IPR019770	GO:0003723\|GO:0003743\|GO:0005737\|GO:0006413
	Pste9g00860	276	Gene3D	RNA Cap, Translation Initiation Factor Eif4e	99	274	IPR023398	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste9g00860	Pste-Chr9	4561793	4564715	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste9g00860	44	276	Eukaryotic Initiation Factors Gene Family	AT5G18110	70.815	2.09e-117	334