LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste9g00851	CTTCCAAACAACGCAATAAATTTCAGTGTCCATGGTACGGCCTTTTCAACTACCTTACATGTCTTGCTTCAACACACGTTCACCTTTCATTCATTGAAGCCTCAAATTACGCACTGCCAATGAACACAGCTTGGTTCCACTTCCCAAGGTGCTACTTGGTGTAAAGTTATAGTCTTTGTTCCTTGAACCTCCTTGAACGTGTCCAAGTTTCATTTTTTCGCTTCTTGGTGCTCTCAAATTTTGTGTTTTTGACATATCTTACGAGATGATGCTGTGCTTTAACCATTGACAAGGTTTTGAAAAAGGGACCATGGCTGCAATTTTGGCAGCAACATCAAAGTTTTTGCGCTCTGTGATTGTAATTGTGACAGCATCCACTGCATTTGTCTACAATTTCTTGCAATTTGGGCCGTGATAGTAAAGTTTTTATGGTCTCTGACACTGTAATTGTGGTTGGATCTTTGTTCACAATTTTCTAAGAATAGGGATGAAATTGTAACCGTCACCGCAATTTAAAAGCTTGTTGATCAGTTTTCTTCTGGGTGGTCTAGTTTTGACATCTTTGAAGTTTGAAGGATCTGTTTTGAGTCTTTTGACACATTCGTCAAATTTGGTGCATGATGTTCCAAGTTGGTTCAATGAGACATTTTTGTTACCTTTATCTTGTGGTTCTTTCATTGTTTTTGTTCATTCCAAACACTCATGAATTAGAAGCATCTCAGACTCAAGCCTTGTTGCAATTAAGAGTTTTTCTAGAGTACCCATCTTCTTTGCAATTTTGGGAATATTACAATGGGGACCTATGTGGCCTTGCTCCATCTGCAAACTTGAGCATAAAATGTGAAGATAATGAGGTAACCGAGCTTGAAATTATGGGTGAAAAGTCTGAGAAGCCTTCACTGTTCAATGGATTTGCAGTTCCTAATCAGACACTACCCATGAATTTCTCCATTGATTCATTTTTCACCACTTTGACAAGGTTGAAGAGTTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGATTTGGGGCCCACTTCCTGATAAGATTCACCGTTTCTCTTTGCTTCAAGTTTTGGACTTGAGCTCCAATTTCTTATTTGGAGCCATTCCTCAAAAGATATCCACAATGGTAAAGCTTCATGCATTGACCCTTGATGACAATTATTTTAACACCACTATTCCTGATTGGTTTGATTCACTGTCTAATCTAAATATCTTGAGTGTGAAGAGCTGTGGTTTAAAGGGTTCATTCCCCTCCTCACTTTGCAAAATTAAGACCCTTGAAGTCATTTCCTTGTCCCACAATGAGCTGTCTGGGGAATTGCCTAATCTAGGTTCTCTCACTGGCCTACATGTTCTGGATTTAAGAGAAAACCATTTAGAATCTGAACTACCATTGTTGCCTAAATCAGTGGTGACAGTGCTGCTTAGCAGTAACTCATTCTCAAGAGAGATACCTAAGCAGTATGGTGAACTGGATCAGCTTCAACATCTAGATCTTTCTTCAAATCACCTCAGTAAGACACCTCCATCTACCTTGTTTTCTCTGCCAAAAATAAGTTATTTAAATCTGGGAAGCAATGTGCTAAGTGGGGCCCTCCCTGACAAACTTTACTGTGGGAGCAAACTTGGATTTGTGGACATTTCTAGTAACAAGTTAAGTGGTGGAATTCCTTCATGCTTGGCCAATACTTCTGATAGTAGAGTTGTCAGATATGCTGGAAATTGTTTATCTGTTGCTTCTCAGAATCAGCATAAAGGGTCTTATTGTGAAGAATCTAGCTCTGGATGGAAGAACATTAAGACATGGGAACTAGCTCTAGTATTGGCTACAATTGTTGGACTTGTTACTGTTCTTTTGGTGTCTGGAATCTTCTTATGGAAAAAATGTCATTCCAGAAAGACAACTGGGCAGGATGTGTTACTAAAGATTGTTCAGGATAACTCCTCAACTGGGGTTTCATCTAATATCCTTGCAAATGCCAGATTTATTTCTCAAACAGTGAAACTAGGGACACAAACTACTTCAACCTGTAGACAGTTTTCAATGGAGGAATTGAAGGAAGCCACAAAAAACTTTGACCTGTCAACTTATATTGGGGAAGGCTCCATAGGAAAGCTGTACAAAGGTAAACTAGAGAATGGATCCTACGTAGCAATAAGGTCTTTGACTCTGACAAAGAAATGCTCAATTCAAAATCTTAGAGCTAAATTGGATTTACTTTCAAAGCTTCAACATCCAAATTTGGTTAGCCTTTTGGGTCATTGCATTGATTATGGTGGACAAGATGATTCAAATTCCCACAAACTTCATCTTATATATGAGTATGTGCCAAATGGGAATTATGGTACCCATCTATCAGAATATTCAGTAGATAAAGCACTTAAGTGGTCTGATAGATTGGCAATTCTAATTGGAGTTGCAAAGGCAGTGCATTTCTTACACACTGGTGTTATACCTGGCTGTTTCAGTAACCAACTAAAGACAAAGAATGTCTTATTTGATGAACACCGTATTCCAAAACTAAGTGACTATGGCATGTCCATCATCACAGAAGAAATAGAAAGATTTGAGAACAATTTGCAATATGGCCTAAGGTCAAAGGCAGAGGATGATGTTTATAATTTTGGATTCATATTGTTCGAGTCACTTGTTGGATCCATAGCATGCGACAAAGGTGAAACATTTTTTATAAACGAAAAGGCATCATTTGGAAGTCAAGATGGTAGAAGAAAGATTGTGGATCCTATGGTGTTGACCACTTGCTCTCAAGAGTCACTATCAATTGCAATAGCAATAACAACCAAATGCATTTCTCCAGAATCTTCATTTCGTCCTTCATTTGAGGATGTTCTATGGAACTTGCAATATGCAGCTCAAGTCCAAGCCACAGCAGATGCAGATCATAAATCAGATTAATTCATTCTACATAGCATCATAGGTCCAACCAAGTGTTTAGTGTAGGAGGCTCAAAACTAGGGCTTCAATTCATCCATTCATTCTCCAACAACTATAAGCATAAATATAAGAAAAAACTTAGATACAGTATTATATGTAGGTGCTGTTGGTGCTATCTGTTATTCAATTCGATTTAAGGTTTCCTTCAATGATAATACGTGAAAACAGTTAATGAATTCCTTTATTTCACGTATTATGGATGTGAAACTCTAAATGTTATTGAAAAACAGTACCAATAATACATATAATATTGTATATAAGTTTTGGCTTAAGTATAATGCAAATGTAAAGGTATACGTTGTAAACATGTTCATCCCATTTCTCTTTTTTTCTTCTTCTAGTTTTGATAGACATAATTAGGATTCATAGACTTTTTTAGAAGGGAATTGGACAAATTATGATGAAGCAAATCATGAACTTGACTAAACCAGTGATAAGATATGAATGTTCCAAGAAGAAATTTGGTGGAATTGAAATTCTAAGTTTGTAACC	3449	0.3729	MMFQVGSMRHFCYLYLVVLSLFLFIPNTHELEASQTQALLQLRVFLEYPSSLQFWEYYNGDLCGLAPSANLSIKCEDNEVTELEIMGEKSEKPSLFNGFAVPNQTLPMNFSIDSFFTTLTRLKSLRVLSLVSLGIWGPLPDKIHRFSLLQVLDLSSNFLFGAIPQKISTMVKLHALTLDDNYFNTTIPDWFDSLSNLNILSVKSCGLKGSFPSSLCKIKTLEVISLSHNELSGELPNLGSLTGLHVLDLRENHLESELPLLPKSVVTVLLSSNSFSREIPKQYGELDQLQHLDLSSNHLSKTPPSTLFSLPKISYLNLGSNVLSGALPDKLYCGSKLGFVDISSNKLSGGIPSCLANTSDSRVVRYAGNCLSVASQNQHKGSYCEESSSGWKNIKTWELALVLATIVGLVTVLLVSGIFLWKKCHSRKTTGQDVLLKIVQDNSSTGVSSNILANARFISQTVKLGTQTTSTCRQFSMEELKEATKNFDLSTYIGEGSIGKLYKGKLENGSYVAIRSLTLTKKCSIQNLRAKLDLLSKLQHPNLVSLLGHCIDYGGQDDSNSHKLHLIYEYVPNGNYGTHLSEYSVDKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNQLKTKNVLFDEHRIPKLSDYGMSIITEEIERFENNLQYGLRSKAEDDVYNFGFILFESLVGSIACDKGETFFINEKASFGSQDGRRKIVDPMVLTTCSQESLSIAIAITTKCISPESSFRPSFEDVLWNLQYAAQVQATADADHKSD	766

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste9g00851	766	ProSiteProfiles	Protein kinase domain profile.	487	752	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste9g00851	766	PANTHER	UNNAMED PRODUCT	117	684	-	-
	Pste9g00851	766	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	571	766	-	-
	Pste9g00851	766	SUPERFAMILY	Protein kinase-like (PK-like)	467	749	IPR011009	-
	Pste9g00851	766	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	450	570	-	-
	Pste9g00851	766	SUPERFAMILY	L domain-like	119	371	-	-
	Pste9g00851	766	ProSiteProfiles	Leucine-rich repeat profile.	220	242	IPR001611	GO:0005515
	Pste9g00851	766	Pfam	Leucine rich repeat	288	347	IPR001611	GO:0005515
	Pste9g00851	766	Gene3D	Transferase(Phosphotransferase) domain 1	571	766	-	-
	Pste9g00851	766	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	32	263	-	-
	Pste9g00851	766	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	265	389	-	-
	Pste9g00851	766	Gene3D	Ribonuclease Inhibitor	265	389	IPR032675	-
	Pste9g00851	766	Gene3D	Phosphorylase Kinase; domain 1	448	570	-	-
	Pste9g00851	766	ProSiteProfiles	Leucine-rich repeat profile.	288	309	IPR001611	GO:0005515
	Pste9g00851	766	Gene3D	Ribonuclease Inhibitor	32	264	IPR032675	-
	Pste9g00851	766	Pfam	Protein tyrosine and serine/threonine kinase	489	678	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste9g00851	Pste-Chr9	4445582	4453348	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste9g00851	8	694	Miscellaneous Gene Families	AT5G14210	54.714	0.0	739

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Pste9g00851		PK_Tyr_Ser-Thr	9.9e-19	CL0016