Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00844 ATGATTTCTGTCCTTTTTCCCAAACCTGGGAAGATGAACAGTTTCTCCTCAATTCAATCACCCCAACATTTTTGTTCTTCAAGATTTTTCTCCCACACTACTACAAGGACTCAACTTTCTTTTCCTGCAAAGGTCTTCTTTTGTCAGGCAAAATCTGGTGTACATGCATCATTGAATACAAAACTGGTGTCTCCCACTCTGTTAGCAGCAGAAAAGGAAGAAGCTAAAGCAGTGTTGACCTTGTTTTTGAAGAAACAAGGTTTGAGCAATGCGATTGCTGCTAGAACAAGCAAGAAGTCAGATCTATTTATTGATCACCTTGTCTCAAAGCTTCACTCTAAACACAAATCTTGGTATCTCTCAGGGAGGGAACTGACTACTCTAGAGATCAGGGATGCGCTTAACCCTTATCTTGAATCTCTTTTTGAAGAGCATGGAGACATTCTAGTGGATGTAGTAGAAAACTATCCAAATCCACCTGTTAAGGATAAATCATCTGTGCCTATTCCTCCTAATCCAGTGTTAGACTCTAAGAAGCTTAAAGCCATGTCTCGAGTGAGTGAGATAGATCCGGATGGTGGCAATCTTCGGCCTCATATTGTCTATCTCCTGGAACTTGGTATGAATATTGAACAGATTAGGAGTATCACACGACGATTCCCATCTTTTGCATACTATAGCTTAGAGGGTAAAATTAAGCCGGTGGTTGAGTTTTTTCTTGAACTTGGAGTGCCAAAAGAAAACATTCCCACCATTCTCACTAAAAGGCCTCAATTGTGTGGAATCAGTCTATCTGAAAATCTTAAACCCACCATGAAGTTCTTTGAATCTTTGGGTGTTGACAAGAATCAATGGCCAAAGGTGATCTATCGCTTCCCAGCATTGCTAACTTATAGCCGGCCAAAAGTGATGGAAAGCATAGATTTTCTCCTTGAATTAGGCCTCTCAGAAGAGAGTATAGGTAAGATTTTAACTCGCTGCCCCAATATTGTTAGTTACAGTGTAGAGGACAATCTCCGACCCACGGCTAAGTACTTCCGTTCTTTGGGGGTTGATGTTGGCATTCTTCTATTCAGATGCCCACAGAATTTTGGTCTTAGCATTGAGACCAACCTAAAACCTGTAACAGAATTTTTCTTGGAGAGGGGATACACTTTGGAAGAAATAGGGACCATGATTTCAAGATATGGAGCCTTGTATACTTTCAGCTTGACTGAAAATTTGATTTCAAAATGGGATTTCTTTTTGACCACAGGTTATCCGAAATCAGAGTTGGTTAAGTTCCCTCAATATTTTGGTTACAGTTTAGAGGAAAGGATTAAGCCTAGATTTGCAATTATGAAAAAATCTGGAGTAAAGCTATTGTTGAACCAGGTTCTTTCACTGTCAAGTAGCAATTTTGATGAAGCTTTGAAAAAGAAAATAAAGAAAATGCAAGTTAGTCAGGATTCCAGTTGTAGCAGCAAAGTCACTCAATTGGATACTGAAAATTGAAACTTTCAGGCAATGTTTCAGGTTAGAAGATGCTCAACTTCATGATTATTTTGTTTTGTTTTGTTTCTGGGGGATCGACGGCACAATGCAGAATTAAGAAGCGAAAAGTTGCAGTTAAACTGGAAAATGGTCAATCAATAGCTACCTTCTGAAACCAAAATACAGCTCAAGCCCATGAACTTAAGCAATAAGCTGCATTAGATTGATTTTGAGCGTGGTAGCTCCTGAAACCAAAATTTTTAACCAGGTTTTTTTACATGGATGACCCTGGTTAGCTCTAGTTACCAATTGCTGCTGTATATGTAAATGGTTATATATCTATATATTAACTGGAGTTCTTACAGTGTTTTCCGTAGTAAAATTGGTGATTAGGGGATGCATGACACTTGACACCAAAGTTTGCCTATTGCTGATTTAACCAAGGTGATAACTCTTTAAATCATCGCATTCTGATCTGAGAAACTGTGTTTCTTTTGCATTTCGATTAACCATGACATACACAGAGAATAGTGTGTAGGCAATATTGTTAGAGTTTGAGAGAAGTTAATGTTGACTATTTAGTCTCAAATGGATGGTTAAGATTGTTTTTTCAAGTAAAATCAATGTTGACCCTGCATAATCCATATATAGTTGTGCGATGAAGATTCATTTTTTTCATCTCTCATGCTCTCACTTAATAGACTTTTGTGTATAAGAG 2191 0.3802 MISVLFPKPGKMNSFSSIQSPQHFCSSRFFSHTTTRTQLSFPAKVFFCQAKSGVHASLNTKLVSPTLLAAEKEEAKAVLTLFLKKQGLSNAIAARTSKKSDLFIDHLVSKLHSKHKSWYLSGRELTTLEIRDALNPYLESLFEEHGDILVDVVENYPNPPVKDKSSVPIPPNPVLDSKKLKAMSRVSEIDPDGGNLRPHIVYLLELGMNIEQIRSITRRFPSFAYYSLEGKIKPVVEFFLELGVPKENIPTILTKRPQLCGISLSENLKPTMKFFESLGVDKNQWPKVIYRFPALLTYSRPKVMESIDFLLELGLSEESIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGVDVGILLFRCPQNFGLSIETNLKPVTEFFLERGYTLEEIGTMISRYGALYTFSLTENLISKWDFFLTTGYPKSELVKFPQYFGYSLEERIKPRFAIMKKSGVKLLLNQVLSLSSSNFDEALKKKIKKMQVSQDSSCSSKVTQLDTEN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00844 497 FunFam Transcription termination factor MTERF5 chloroplastic 257 477 - -
Pste9g00844 497 Pfam mTERF 202 381 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 Pfam mTERF 302 467 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 Gene3D Transcription termination factor 3, mitochondrial 257 477 IPR038538 -
Pste9g00844 497 SMART mt_12 390 421 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 SMART mt_12 214 245 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 SMART mt_12 177 209 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 SMART mt_12 354 385 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 SMART mt_12 422 453 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 SMART mt_12 321 352 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 SMART mt_12 286 316 IPR003690 GO:0003690|GO:0006355
Pste9g00844 497 PANTHER CGI-12 PROTEIN-RELATED 144 472 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pste9g00844 mTERF 2.3e-32 No_clan