Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00834 AAAGAGAGAGAGAGAGCACTGAGACTGTGTTGAGTTGTGTTGTGTGTGACATGTAGCACCAAACTCAAACTTAACTTTCTTTCTCCTCTTTCTCTTCTTCTTCTTCTTCTTCTCAGTTTCACTTCTCTTCTTGCTCATGGACATGGATGTTTGCACAAATGTATCAGTTTCAGATGAGTGTCAGCAAGAGCTTCCCACCCTTGATGACCTTTTCTCTAATCAGAACATGGAAGTGGATTTTGGCATGGAATGGTTGTCAGTGTTTGTGGAAGACTGTTTTTCTAGTAAGCCAAGTTGCCTCTTGGCACCACCTGGTGTTCAAGCCACAAGCACAAAGCCTTCAAGCACAATGCAAAGGCCACAACAAAGTCACTGTCCTTTGCAGAATTTTGCTGTGCCAGGGAAAGCAAGGAGCAAGAGGAAGAGGCTTTCAGCCCCTAGAACAAAACACACTCTAAGCACATGGTCACAGCACTTCAGCACACAAAGTGAAGGGTTGAGTTCTGACCCTCCTCTTTTGAAACAAGCCTATTGGTTGGCAGATAGTGAACTCATTGTGCCTAAGAAGAAGGATGTTGTTGAGCAAGAAAAGGTTGTGGTGGTGAGGAAGGAGAAATTGGAGGATTGTTGTGAGATTGAAGTTAAAGATAACAATAATAATAGTAATAATAATAATGGACAGCACCCAATTCCAAGAAGGTGCACACATTGTCTGGCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTGGGTCCAAAGACACTATGCAATGCATGTGGGGTGAGGTACAAGTCTGGAAGGTTGTTGCCAGAGTATAGGCCAGCCAAGAGTCCTACTTTTGTAAGCTATTTGCATTCAAATTCACACAAGAAAGTCATGGAGATGAGAATGGGGGTCCTGTCTGCAGAGAAGTAGTGAAATGATGTTACTATATACTTTTTAATGTATAATCAAAACTTCAAAATTAAGCAACAAATTATTTGGAAACAGACATATACCATCAAAGAGGGAAGAGGGGGGCACATTATATTATGAGCTTTATGAACCACACTTTGAAAAGTACTAATACAAGTTCAGATTATAGGCATTTTGGATTGCAGGTAAAAAAAGTAATTTTGAAACAAAATTAGTTTTTCAACAGATTAAGAACTTTGTTTTTGCTTTCATTTTTAATTTCCCCATTTTAACTCAAATGATGACTTAAGATTAAAAAATGATGTTAGTCACTATAGTTTTACTAAATGTGTTGCAGCTTACAATCCAATAATTCAAAGTTGTTCACAACAGATTACATCCAAAGTTCAAAGACATGCTTTATAAGTATTGCATGTTCTTACATCAAAGAATGGCTAATAGAAATAAGCCTTTGTTCTTTACCCTTCTCTATATGGTATATCTTTGTTTGGATAATTGGATTTCCTTCCATTTTATTACAGTATTTTTCAACTTATACTCAAACATGCTCATAATATTATATACCCACATTATTGTTGCCCTCTGGTGTTTCCAA 1511 0.3812 MDMDVCTNVSVSDECQQELPTLDDLFSNQNMEVDFGMEWLSVFVEDCFSSKPSCLLAPPGVQATSTKPSSTMQRPQQSHCPLQNFAVPGKARSKRKRLSAPRTKHTLSTWSQHFSTQSEGLSSDPPLLKQAYWLADSELIVPKKKDVVEQEKVVVVRKEKLEDCCEIEVKDNNNNSNNNNGQHPIPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMGVLSAEK 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00834 259 Pfam GATA zinc finger 189 223 IPR000679 GO:0006355|GO:0043565
Pste9g00834 259 PANTHER GATA TRANSCRIPTION FACTOR 16 255 - -
Pste9g00834 259 Gene3D - 179 249 IPR013088 GO:0006355|GO:0008270
Pste9g00834 259 CDD ZnF_GATA 188 235 IPR000679 GO:0006355|GO:0043565
Pste9g00834 259 SMART GATA_3 183 237 IPR000679 GO:0006355|GO:0043565
Pste9g00834 259 FunFam GATA transcription factor 177 258 - -
Pste9g00834 259 ProSiteProfiles GATA-type zinc finger domain profile. 187 219 IPR000679 GO:0006355|GO:0043565
Pste9g00834 259 ProSitePatterns GATA-type zinc finger domain. 189 214 IPR000679 GO:0006355|GO:0043565
Pste9g00834 259 MobiDBLite consensus disorder prediction 59 83 - -
Pste9g00834 259 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 185 247 - -
Pste9g00834 259 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00834 Pste-Chr9 4360041 4362006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00834 37 251 C2C2-Gata Transcription Factor Family AT4G32890 42.667 8.41e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pste9g00834 GATA 1.1e-14 CL0167