Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00823 ATGAATGATGCTGAGAACATATGCCCGTTTTGTGAGACAGAATTTTCTGAGGTAATGGACAATCTGAGGGACCAGAATGATGTTATTGACCTAAGGTCAGCTTGGGTGTTCTCACTTTATGCACCAATTTTTCTTGGTTTGATGGGTGCATTCAGCCCTTCTCTTGCAAGAATTGCTCCATTAGGAGGCAGCAGCTCAAGGGGGGAGGAACAAGAGGTTGATCAAGAGAGGGAAAATGACCTTGTGCTTGGGAGAAGGAGAAGAACTTCAACTTACATGATGCATCTTTTTCGCGGTCTTCATGTTAGGATGGTGTCTGAACTTGAAAGCCCTGAAGAAACTAGGAACATGGATGGAAGCAGTATACTTGTGATTGAACAATTCAATGAGGGTGCATTGATTGTGAGAGGGCCTAACTTGAACCATACAAGTAGTCCAAATGAGAACAATGCTATTGGCAGCTCCTTGAATGACCTTGCGGTAGGTTCTGGCTTTGATTTGTTGCTACAGCATTTGGCACAGATTGGTCCTGCAGGGTATTCAAGTGTGAACCCTCCAGCACAGAAGGCTGCAATTGAAGCATTGCCTAGTGTGACTAGTGAGGAGAAGTTGCAGTGCACAGTGTGTTTGGAGGATGTTGAGTTTGGGAGTGAAGCAAAGGAGATGCCATGTAAGCATAAGTTCCATGATGACTGCATTGTCTCATGGCTCAAACTTCATGGTTCTTGTCCAGTTTGCCGGTTTCAGATGCCATCTGAGGAACCAAGTGTTGAAGCGAATGAAGGAATAGGAACTGGTGACAATCTGAACAATGAGCTAGTCAGAGCTGGAGAAGAGAGGCCAAGAAATGGAAGGAGGAATTGGTCTGGTGAATTGATTCCTAACTTTAGCAATTGTCATACTTAA 906 0.4437 MNDAENICPFCETEFSEVMDNLRDQNDVIDLRSAWVFSLYAPIFLGLMGAFSPSLARIAPLGGSSSRGEEQEVDQERENDLVLGRRRRTSTYMMHLFRGLHVRMVSELESPEETRNMDGSSILVIEQFNEGALIVRGPNLNHTSSPNENNAIGSSLNDLAVGSGFDLLLQHLAQIGPAGYSSVNPPAQKAAIEALPSVTSEEKLQCTVCLEDVEFGSEAKEMPCKHKFHDDCIVSWLKLHGSCPVCRFQMPSEEPSVEANEGIGTGDNLNNELVRAGEERPRNGRRNWSGELIPNFSNCHT 301
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00823 301 ProSiteProfiles Zinc finger RING-type profile. 206 247 IPR001841 -
Pste9g00823 301 Pfam Ring finger domain 205 247 IPR001841 -
Pste9g00823 301 SMART ring_2 206 246 IPR001841 -
Pste9g00823 301 SUPERFAMILY RING/U-box 196 252 - -
Pste9g00823 301 FunFam E3 ubiquitin-protein ligase RNF181 177 253 - -
Pste9g00823 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 253 IPR013083 -
Pste9g00823 301 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 107 251 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste9g00823 Pste-Chr9 4290071 4291588 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00823 163 273 C3H Transcription Factor Family AT1G26800 43.750 1.01e-21 89.0