Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00764 GGGAAACTCTCCCCTACCATCACCATCATCCATTTTTTTCTATTCCATCAAATGGGTTGCATTAGCTCTAAAAGTGTGGTTTCTGGAGCATGTTCTCCATCACCGGTGGTGTTTGAGATTGCAGAGTCGGGTTTTATTTCCAACAAGGTCCATTCTAGGTTAACAATCTTGGAATCCAAAACAAGTTCAGATGATGAGAGGAACAAGAAGTTAAAACGGAAAAATTCAAAGAAAAGTAATGAGTCTTTTAGCTTCAAGCTTGGGTTGCCTCAAAAGTATGTGGAGGCTGAACAGAATGCAGCTGGTTGGCCTCCTTGGCTCATAGCTTCTGCAGCAGAAGCCATTCAAGGTTGGATCCCTCTCAAAGCTGATTCTTTTCAAAAGTTAGAAAAGATTGGACAAGGTACATATAGTAGTGTGTTCCGAGCTCGTGAAGTTGAAACTGGGAAAATGTTTGCTTTGAAGAAAGTGCGGTTTGACAATTTCCAACCTGAGAGCATTAGGTTCATGGCAAGAGAAATAACAATCCTTCGTAGGCTTGACCACCCAAACATCATGAAATTGGAGGGCATAATCACCTCTCGTTTATCAAATAGCATATACCTTGTGTTTGAATACATGGAGCATGATCTTGCTGGCCTCGTCTCACGTCCAGATATAGTGTTCACTGAATCACAGGTTGAACAATTACACAAAATTTTTAAATTGTGTGGTTCACCACCTGAGGAGTTCTGGAAAAAGACTAAGCTCCCTCATGCAACAATGTTTAAACCTCAAGCTAATTATGAGAGCTCCCTTCAAGAGAGGTGTTCAGATTTTCCTATATCCGCTGTAGGCTTACTTGAAACTTTATTGTCGATTGATCCAAGCAATCGGGGGACTGCCTCATCTGCTCTAATGTCTGAGTATTTTAGTACCAAGCCATATGCTTGTAATCCATCAAGCTTGCCAAAGTATCCACCTAGCAAAGAAATGGATGTCAAAAGTATGGAAGATTCATCTAGGAAAAAGACTGGAGGTAAAATGAGAGAGGTTGCAACATCAAGAAGGCAACAAAGAGGAGTTAGTAAAGCTCTGCAAGATCCAAACAATTTTGACAAATTGACTTCAAAAGAGGTAGAAATGCAAAATATGCCTCAACATGCTTATAGAGATGACATTAAAGCACATTTTACAAAGGCAAAAGGAGGAATCACGCATAAAGGGCATACAAAGCCTCAATTGGATGTTTTGTCTGAAACTTCCCAAATGATGAATGTTGTCGATGGTAATGGCTATAGTGTGCCAACACAAGTCCCAGGATCTAACGCTACCTTTACATGGGTTAAAAGGAAAAAACAAGATACATCATCAACTTTATCAGATGGCTCAAGAAGCAAAATTAGTGCATTAGATCCTAACTTTGCAAAAGGCACATATGACTTAACTAACCAAAGGGTGTCCATGGATTTTGATCCTGCAGAACTAGTGAATTCTCAG 1479 0.4003 GKLSPTITIIHFFLFHQMGCISSKSVVSGACSPSPVVFEIAESGFISNKVHSRLTILESKTSSDDERNKKLKRKNSKKSNESFSFKLGLPQKYVEAEQNAAGWPPWLIASAAEAIQGWIPLKADSFQKLEKIGQGTYSSVFRAREVETGKMFALKKVRFDNFQPESIRFMAREITILRRLDHPNIMKLEGIITSRLSNSIYLVFEYMEHDLAGLVSRPDIVFTESQVEQLHKIFKLCGSPPEEFWKKTKLPHATMFKPQANYESSLQERCSDFPISAVGLLETLLSIDPSNRGTASSALMSEYFSTKPYACNPSSLPKYPPSKEMDVKSMEDSSRKKTGGKMREVATSRRQQRGVSKALQDPNNFDKLTSKEVEMQNMPQHAYRDDIKAHFTKAKGGITHKGHTKPQLDVLSETSQMMNVVDGNGYSVPTQVPGSNATFTWVKRKKQDTSSTLSDGSRSKISALDPNFAKGTYDLTNQRVSMDFDPAELVNSQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00764 493 Gene3D Phosphorylase Kinase; domain 1 122 215 - -
Pste9g00764 493 Pfam Protein kinase domain 126 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00764 493 SUPERFAMILY Protein kinase-like (PK-like) 118 328 IPR011009 -
Pste9g00764 493 MobiDBLite consensus disorder prediction 324 350 - -
Pste9g00764 493 ProSiteProfiles Protein kinase domain profile. 126 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00764 493 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Pste9g00764 493 MobiDBLite consensus disorder prediction 314 363 - -
Pste9g00764 493 FunFam probable serine/threonine-protein kinase At1g54610 113 208 - -
Pste9g00764 493 PANTHER CELL DIVISION PROTEIN KINASE 124 222 - -
Pste9g00764 493 Gene3D Transferase(Phosphotransferase) domain 1 216 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00764 Pste-Chr9 3980610 3985594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00764 211 344 Core Cell Cycle Gene Families AT5G10270 37.037 2.94e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste9g00764 Pkinase 1.2e-19 CL0016