Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00755 ATGGCAAGGAAGAGAAAGGTTGCTGAAGTGGTGGAAGAGAGAAACCTATGTGAGGGAACCATGGATTGGGATGAGATGATGAAACAAGCTGCAACACTTGGAGGAGTCCAAAGAGCCAGGAAGAGGTTTGTTGGTGTAAGGCAAAGGCCATCAGGAAGATGGGTGGCTGAGATCAAAGACACTATTCAGAAGATAAGAGTGTGGTTGGGAACTTTTGACACTGCTGAGGAAGCTGCAAGAGCCTATGATGAAGCTGCTTGCTTGCTTCGTGGTGCCAACACAAGAACAAACTTCTGGCCTTGCTCTCAATCCTCCACAAGTCCAGCTCTTTCTTCAAAGATCACCAATCTCCTCCTTCAAAGGCTTAAAGAAAGAAATAACAACACTTTCTCCTCCTCCTCAACCTCACTTCTCATCAACCACCACCAACAAATGCAGCAACAAGTTGATGCATATGGAGAAGGATCAACAACACAATTCTCAATTGACCAATTCACTGATTTCCTCAATGACCCTGAAGATTATATCACAAGCAACAATGACTTCATCAACAACAGTGCACAAATTGATTACATTACTAGTAGCTTTGAGTCTTGTTTAACTGAAAAAGATGGGGTGTCAGAAATGGATATGCAATACAAGTCCATCAATGTGACACCACAGACTTCAAGTAATGACAGTAATTCAGGAGTGGAGGACAGTGAAGAAGAAAGCACTGATTTGGGTGTCCAAAGCACTAATTTTGATGTTCATGATTTTAGGTTTCTTGACAACATAGCTCCACCTAGTTACTATTCTCCTTTTGATATGGCTCAAGAAATGGAGGAGCCTGTTGAGCCTGAGAATGAGAACTATGGTGATGAGCCTTCAATGCTTACGGCTGTCATGAAGAGAATGAAATATGAGAGGAAGTTCTCAGCTTCTCTCTATGCCTTCAATGGAATACCTGAATGCTTGAAGTTGAAATTTGAATCAGGAAACATGAAAGGAAGAGGACTAGCTGATCAATTAACCAACCTCCAAATGGCATGCAGCAAAAAGAAAGTTGAGAAGAATAAGGAGGACACTCATATGGGAACAATGGATAGGAAACTTGAAGAACAGCAACAAATATCAACTGACATGGATTCTTCTTCTACATCCAGTGTTGATGGGGAGCTGTTACTTTGGAATTCACTTGATCTTCCTCCTATTTGCTTTGTTAACTTACTAGAAAACGGTTCATTCAATTAG 1233 0.4128 MARKRKVAEVVEERNLCEGTMDWDEMMKQAATLGGVQRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSQSSTSPALSSKITNLLLQRLKERNNNTFSSSSTSLLINHHQQMQQQVDAYGEGSTTQFSIDQFTDFLNDPEDYITSNNDFINNSAQIDYITSSFESCLTEKDGVSEMDMQYKSINVTPQTSSNDSNSGVEDSEEESTDLGVQSTNFDVHDFRFLDNIAPPSYYSPFDMAQEMEEPVEPENENYGDEPSMLTAVMKRMKYERKFSASLYAFNGIPECLKLKFESGNMKGRGLADQLTNLQMACSKKKVEKNKEDTHMGTMDRKLEEQQQISTDMDSSSTSSVDGELLLWNSLDLPPICFVNLLENGSFN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00755 410 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Pste9g00755 410 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Pste9g00755 410 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 306 - -
Pste9g00755 410 CDD AP2 41 98 IPR001471 GO:0003700|GO:0006355
Pste9g00755 410 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Pste9g00755 410 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Pste9g00755 410 SUPERFAMILY DNA-binding domain 42 99 IPR016177 GO:0003677
Pste9g00755 410 FunFam ethylene-responsive transcription factor RAP2-11 41 100 - -
Pste9g00755 410 Gene3D AP2/ERF domain 41 99 IPR036955 GO:0003700|GO:0006355
Pste9g00755 410 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Pste9g00755 410 MobiDBLite consensus disorder prediction 217 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00755 Pste-Chr9 3939838 3941070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00755 40 118 AP2-EREBP Transcription Factor Family AT5G19790 73.418 1.23e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste9g00755 AP2 8e-15 CL0081