Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00739 AAATTACGCAACGTTTTATTGAGAGAGTGTGCATAGCTAGAAATTAAATTAAGGTGATAACTGATAACAATGGCTGGTATTGTGTTAACTGTGTCACAAGATGGAAGTGGACAGTACCGGACGGTGCAGGAAGCAATAGATGTTGTGCCACTCTGCAACACTCGCCGGACGGTGATTAGGGTGTCGCCGGGAACTTACCGGCAGCCCCTCTACGTGGCAAAGACTAAGAACTTCATCACCATCCTTGGCTTAAGCCCTGAGAACACTGTTCTCACTTGGAACAACACTGCCACCTCTATCAACCACCACCAGGATGCTAGGGTAATAGGGACTGGAACCTTTGGTTGTGGCTCCACCATTGTGGAAGGAGGGGACTTTATTGCTGAGAATATTACCTTTGAGAATTCTTCCCCTCATGCCGCAGGGCAAGCAGTGGCAATTAGAGACACATTGTACTTACATTATGGAAAACAATATTTGAGAGATTGTTATATTGAAGGAAGTGTGGACTTTATTTTTGGTAATAGTACTGCACTCTTGGAACATTGTCACATCCATTGCAAGTCTGCAGGGTTCATAACTGCACAGAGCAGAAGCTCTCCACAGGAAAAAACTGGTTATGTATTCCTCAGATGTGTTGTCACAGGTAATGGGGGAACTTCATATGCATATCTTGGAAGACCATGGAGACCTTTTGCAAGAGTGGTCTTTGCATTCACTTATATGGATCATTGTATAAAGCCTGCTGGCTGGAATAATTGGGGCAAAATTGAGAATGAAAAAACTGCTTTCTTCTATGAATACAGGTGTTTTGGAGCGGGTTACTGTCCATCCCAACGAGTAAAATGGGAAAGAGAATTAAAGAAGGAAGAAGCAGAGAAGTTTCTGATGCATAGCTTTATTGATCCAGAATCAGAAAGACCTTGGCTTGCACAGAAAATGGCCTGGAGGGTTCCATATTCTGCTTAGAAATTGTTGAGACTTGAGAATACAAGCTCCCAAACAGTTCATTACAAGTGCCATTGTTCTACTGCTTCATGTCATGTCAATCTACATAAGAAACAAAATGAATTCTAAATCTTTAAATTTATGTACATCATAAATGGATTGTGAATTAAGATGGAATGACTGTATTAAACTGTTTT 1145 0.4131 MAGIVLTVSQDGSGQYRTVQEAIDVVPLCNTRRTVIRVSPGTYRQPLYVAKTKNFITILGLSPENTVLTWNNTATSINHHQDARVIGTGTFGCGSTIVEGGDFIAENITFENSSPHAAGQAVAIRDTLYLHYGKQYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRSSPQEKTGYVFLRCVVTGNGGTSYAYLGRPWRPFARVVFAFTYMDHCIKPAGWNNWGKIENEKTAFFYEYRCFGAGYCPSQRVKWERELKKEEAEKFLMHSFIDPESERPWLAQKMAWRVPYSA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00739 299 Gene3D - 5 125 IPR012334 -
Pste9g00739 299 Gene3D - 126 293 IPR012334 -
Pste9g00739 299 ProSitePatterns Pectinesterase signature 2. 142 151 IPR033131 -
Pste9g00739 299 SUPERFAMILY Pectin lyase-like 3 286 IPR011050 -
Pste9g00739 299 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 287 - -
Pste9g00739 299 Pfam Pectinesterase 7 279 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00739 Pste-Chr9 3854174 3858719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00739 5 292 Carbohydrate Esterase AT5G47500 35.987 8.85e-61 195