Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00730 GTGAAGGTTAATTCCAAAATGGGAAGACAACCTTGTTGTGATAAGGTTGGTTTGAAGAGAGGTCCATGGACTATTGAGGAGGATCATAAGCTTATGAATTTCATCCTCAATAATGGTATACACTGCTGGAGAACAGTTCCCAAGCTAGCAGGATTGTTAAGATGTGGAAAGAGCTGCAGATTGAGATGGATTAATTATCTGAGGCCAGACCTCAAGAGAGGTGGATTTACTGAAATGGAAGAGGATCAAATTATACAACTACATTCATGTCTAGGTAACAGGTGGTCTAAGATTGCTTCACATTTTCCAGGGAGGACAGACAATGAAATCAAGAACCATTGGAATACAAAGATCAAAAAGAGGTTGAAGCTCCTTGGTTTGGACCCTTTGACCCTGAAGCCAAATGAGCAAACAGAAGAGTCTAGTGATGAAAAGAATAAAAACACTTCAAAAGTGTGTGAACAAGGTGTGGAGAATAAGTCCTTGGACATGCATGACACAAAAGAAGTGCCGAAAACAGAAGGGAAAATGGAAGAGAAAAAGGTGACTTGGGATGATGATGATGATACCATTGGACTTTTAAACAATTATGAAATGCTATGCTCACAATTGGACTTGGGATCATGGATGAGCCAAGAAACCAAAACCAGCACTAGTTCTTATTGTAGCTCTTCTTCTTTCTCATTGGATGATTCAAGCAACCTCTCTGTGGATGAATCCTCTTACTTTCAAGAAAATTCCTTGCAACAATGGGTTGATGGTTTAGATTGCATTCTCTCATGGGATAACTTCAATTCTCTTGAGAAAGATTTCCCCTTCTTGGAATATAAGCAATAA 837 0.3907 VKVNSKMGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIHCWRTVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHSCLGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKLLGLDPLTLKPNEQTEESSDEKNKNTSKVCEQGVENKSLDMHDTKEVPKTEGKMEEKKVTWDDDDDTIGLLNNYEMLCSQLDLGSWMSQETKTSTSSYCSSSSFSLDDSSNLSVDESSYFQENSLQQWVDGLDCILSWDNFNSLEKDFPFLEYKQ 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00730 278 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Pste9g00730 278 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Pste9g00730 278 CDD SANT 76 116 IPR001005 -
Pste9g00730 278 Gene3D - 75 157 - -
Pste9g00730 278 MobiDBLite consensus disorder prediction 137 151 - -
Pste9g00730 278 FunFam MYB transcription factor 74 135 - -
Pste9g00730 278 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 232 - -
Pste9g00730 278 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Pste9g00730 278 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Pste9g00730 278 SUPERFAMILY Homeodomain-like 17 114 IPR009057 -
Pste9g00730 278 FunFam MYB transcription factor 17 73 - -
Pste9g00730 278 CDD SANT 22 67 IPR001005 -
Pste9g00730 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Pste9g00730 278 SMART sant 19 69 IPR001005 -
Pste9g00730 278 SMART sant 72 120 IPR001005 -
Pste9g00730 278 Gene3D - 17 73 - -
Pste9g00730 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
Pste9g00730 278 MobiDBLite consensus disorder prediction 133 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00730 Pste-Chr9 3814120 3815673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00730 7 200 MYB Transcription Factor Family AT5G16600 59.091 2.64e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g00730 Myb_DNA-binding 8.9e-12 CL0123