Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00711 ATTAAGTCCATGTCCCTCTCTCTCTCCCTCTATCTCTCTCCCCATAGTTTTCTTCTCTTCATTGTGCTATATAAATAAGAGGAAAAGCTACTGCAGTCTTTAGTGTTAGTGTTTGTTTTCCCTTGCAAATGGGACGATCACCATGCTGCGACAAGGTTGGTTTAAAGAAAGGACCATGGACTCCAGAGGAAGATCAGAAGCTCTTAGCTTACATTGAAGAACATGGCCATGGAAGCTGGCGTGCCTTGCCAGCAAAAGCTGGACTTCAGAGGTGTGGCAAGAGCTGCAGACTGAGATGGACCAATTATCTTAGGCCTGATATTAAGAGGGGAAAGTTCAGTTTGCAAGAAGAACAAACCATCATTCAACTCCATGCCCTCTTAGGAAACAGGTGGTCTGCAATAGCCACACACTTGCCAAAGAGAACGGACAATGAGATCAAGAACTATTGGAACACGCATCTTAAGAAAAGGTTAACCAAAATGGGAATTGACCCTGTGACACACAAGCCAAAAAATGATGCACTTCTCTCTAGTGATGGCCAATCCAAAACTGCTGCAAACCTCAGCCATATGGCTCAGTGGGAGAGTGCACGCCTTGAAGCTGAAGCAAGACTAGTAAGAGAGTCAAAACTACGTTCACATTCACTTCAGCAACATGGAAGTTCTTCAACATTTGCATCTTCATCTTCTGCATCAACTTCAGCTTCAGTTCTCAATAATAGCAATAACAACAATAAACAAGGAGCACAACCATCGCCGCCGCCGCCGCCGCCGCCACCTTCACGATCTTCCCTTGATGTGCTCAAGGCTTGGAATAATGGAGGGTGGTTAAAACACAATGAAGGAAACGGTGGCATTGCAAGCAATGTTGGGGTAAGTGGGGACCTTGAGTCTCCTACTTCTACACTATCTTTCTCTGAGAATGCACCACAAATTATGAATGGAATTGGAGGAGAAAACAACAACAACAATGATAATGCAATGCCTATGATTGAGTTTGTGGGAAGTTCAGGTAATTCTTCCTCCCTTGTGAAAGAAGAGGGTGAGCAAGAGTGGAAAGGTTATGATCATGGTTCTATCACCACATTTAGTTCTGGTCTGCATGAGTTCACAATGAATATAGAAGGCACGTGGGCCTCTGAGTCCCTTAGGACTAGTGGCTCGCATGATGATGACATTGTTGAAGAAGGGTTCACCAATCTTCTGCTTAAAACAAACTCTGACGACCCAAGTTTGTCATCAGAAGGTGGAGGAGACTCTAACAATGGTGATGGTGGTGGTAGTAATAGTGATTTCTACGAAGATAACAATAATTATTGGAACAGCATTCTCAATTTAGTGAATTCATCCCCTTCTCATTCTCCTATGTTCTAGTTTTAGTTGGGGATGTATCATCTCAGATTGAATTTTTACCTAATTTTGTTACATGAAAATTTTGTGTTTATCTCTAGCTTCATAAGGGTTTACAAAAATTTTACAGGGCTAAATTTATTTAATGCTTATGAAGAAAGAGATAAATGCAATGTCATGTGACAAGGTAAAGTGAAAATTCAAATACAAGAGGACTTATTTGCGTGTTGGAAAGGGTATGTGTAAGTCACATATAGGCAGCATATTCCACAAACTCAAACCTAAGTCAGCAGTGGTTGATTTTCTCCCCATCATCACCTTAAAGAGAACATGCTCAGAGAAAAATGTGGATTTCCAAAGAGTGGTTTTTGTTGATGCTTTAACAGAGACTATTTTCTATTTATTTTTTTCTTCCCTTGGAAGTGTGTTATTGTAATTCTCTGATAGCTTGTTTTGGAAAACAGCTTACTTGGTTGGTCGTTTCCACCATCAAAATGTTCATACCAATTTGTTTGGATTTGGCTTGATTTGATAAGTTTCTATGGTTTTTGGATTTCTATGAGTGGAGGATATGCTTGGATCGATAGTCAAACTTATACTAGACAAGGGTGTGTGCGAATTAAATGACTTTTACACCAAGTAATTAATTTTCCGGTGTTCAAACTGTATACAAAAAAATTCAATAAAGGAAACATTTAGTATGGAC 2058 0.4014 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNDALLSSDGQSKTAANLSHMAQWESARLEAEARLVRESKLRSHSLQQHGSSSTFASSSSASTSASVLNNSNNNNKQGAQPSPPPPPPPPSRSSLDVLKAWNNGGWLKHNEGNGGIASNVGVSGDLESPTSTLSFSENAPQIMNGIGGENNNNNDNAMPMIEFVGSSGNSSSLVKEEGEQEWKGYDHGSITTFSSGLHEFTMNIEGTWASESLRTSGSHDDDIVEEGFTNLLLKTNSDDPSLSSEGGGDSNNGDGGGSNSDFYEDNNNYWNSILNLVNSSPSHSPMF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00711 415 MobiDBLite consensus disorder prediction 168 225 - -
Pste9g00711 415 MobiDBLite consensus disorder prediction 173 206 - -
Pste9g00711 415 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pste9g00711 415 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste9g00711 415 MobiDBLite consensus disorder prediction 362 390 - -
Pste9g00711 415 CDD SANT 69 112 IPR001005 -
Pste9g00711 415 Gene3D - 69 116 - -
Pste9g00711 415 MobiDBLite consensus disorder prediction 132 147 - -
Pste9g00711 415 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste9g00711 415 CDD SANT 16 61 IPR001005 -
Pste9g00711 415 Gene3D - 13 66 - -
Pste9g00711 415 FunFam MYB transcription factor 69 116 - -
Pste9g00711 415 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 252 - -
Pste9g00711 415 SMART sant 66 114 IPR001005 -
Pste9g00711 415 SMART sant 13 63 IPR001005 -
Pste9g00711 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste9g00711 415 MobiDBLite consensus disorder prediction 119 147 - -
Pste9g00711 415 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste9g00711 415 MobiDBLite consensus disorder prediction 207 221 - -
Pste9g00711 415 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste9g00711 415 FunFam MYB-related transcription factor 13 66 - -
Pste9g00711 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00711 Pste-Chr9 3658841 3661884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00711 1 415 MYB Transcription Factor Family AT3G01140 55.609 2.59e-127 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g00711 Myb_DNA-binding 1.5e-15 CL0123