Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00698 ATGGTCTCAACAGCTCAAGTGTGTCAGGGTTTGACGCAAATGGCTCATCTTAGTTTTTTCCTTCTGGGGTGTCTCTCCATGATCTCATATGGTAATGGTTATTATGTGAGCAATGAGGGTTGGACCAATGCACATGCCACATTCTATGGTGGAAGTGATGCTTCTGGCACAATGGGTGGGGCTTGTGGTTATGGAAACTTGGTAAGGTGCAGAAGAAGAAGAGGTGGAATAAGGTTCACCATCAATGGTCATTCATACTTCAATTTAGTCCTTGTGACTAATGTTGGAGGTGCTGGTGATGTGCATTCTGTAGCCATCAAAGGTTCAAGAACTAGATGGCAAGCCATGTCAAGGAATTGGGGCTAA 366 0.4454 MVSTAQVCQGLTQMAHLSFFLLGCLSMISYGNGYYVSNEGWTNAHATFYGGSDASGTMGGACGYGNLVRCRRRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAIKGSRTRWQAMSRNWG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00698 121 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 86 121 IPR007117 -
Pste9g00698 121 SUPERFAMILY PHL pollen allergen 73 121 IPR036749 -
Pste9g00698 121 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Pste9g00698 121 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Pste9g00698 121 PANTHER EXPANSIN-A15 68 121 IPR002963 GO:0009664
Pste9g00698 121 Pfam Expansin C-terminal domain 77 121 IPR007117 -
Pste9g00698 121 Gene3D - 29 111 IPR036908 -
Pste9g00698 121 PRINTS Expansin signature 87 108 IPR002963 GO:0009664
Pste9g00698 121 PRINTS Expansin signature 75 87 IPR002963 GO:0009664
Pste9g00698 121 SUPERFAMILY Barwin-like endoglucanases 34 67 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00698 Pste-Chr9 3557455 3559170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00698 13 67 Expansin Gene Family AT2G03090 60.000 7.58e-13 61.2