Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00681 ATGGGGTGTTTGGTAGGAGGAAGTGTTATGAACATGATGTCAAAGACTCTTGCATCAATAGTAGGAGGAACTGCAGGAGCTGTGGTATTGGCTGGGATGATTATAGTACTTATATGGTTCTATCTATGTCACTATAGGAGTGTTTCATCAGAGACAGGATCCTCTGATCCTTCACAAGTGAGAAAAATTGAGTTACCATTACAAGACACTAGGTGCTTTGAGATGGAGGAACTATCTCTGGCCACAAAAGAATTCAGTGAGAGAAATTTGATTGGAGATGGGAAATTTGGGGAGGTTTACAGGGGATTACTTCAAGATGGGGTGCTTGTAGCCATTAAAAGGCGTCATGCACTTCCTAGTAAGGAATTTGTTGATGAGGTACGGTATCTCTCATCCATTCACCATCGGAATGTTGTGACACTTTTAGGTTACTGTCAAGAAAACAATCTACAATTTCTTATATATGAATATGTGCCTAATGGGAGTGTTCCCAGTCACTTGTATGGTGTTGGTCAACAGCCACATGAGAAGCTACAATTCAAGCTTAGGCTTTCAATAGCTCTAGGAGCAGCTAAAGCCAATGTTCTCGTGGATGAAAACTTCATTGCTAAGGTTGCAGATGCAGGACTTCATAACATTTTTGGAAAAGATGAGATTCCTGGTCCCTCTTCTCAAGTGGTATCAGAAGAGATATTCCTTGCTCCTGAGGTGAAAGAGTTCAGACAATATTCTGAAAAGAGTGATGTATATAGCTTTGGTGTATTTTTGCTGGAATTGTTAAGTGGAAAGGAAGCAACAGAATCACAACCTTCAGATTCTTATCAGAACCTCGTTGAATTGGTATGTGATTATTGTCAAAATTCATGTCAACCTTTATTTTTGGGGTATGTACAAAGTAATGGCAACATGTTTAACATCATTGATCAAAGATTGGGGAAAAGTTTTACTGCTGAAGGGGTGAAAGACTTCATGCAGCTGATAGTTCAATGTATCAATCTTTCAAGTGAGAAGAGACTTTCCATGAGCTTTGTGGTAATTGAACTTGATCAAATACTTGAAAAGGAAATGAAGTTAACCACAAGCATGGGTGAAGGAACTCCAACTGTGACTCTAGGAAGTCAATTATTCAAAACAACAAGATAA 1143 0.3893 MGCLVGGSVMNMMSKTLASIVGGTAGAVVLAGMIIVLIWFYLCHYRSVSSETGSSDPSQVRKIELPLQDTRCFEMEELSLATKEFSERNLIGDGKFGEVYRGLLQDGVLVAIKRRHALPSKEFVDEVRYLSSIHHRNVVTLLGYCQENNLQFLIYEYVPNGSVPSHLYGVGQQPHEKLQFKLRLSIALGAAKANVLVDENFIAKVADAGLHNIFGKDEIPGPSSQVVSEEIFLAPEVKEFRQYSEKSDVYSFGVFLLELLSGKEATESQPSDSYQNLVELVCDYCQNSCQPLFLGYVQSNGNMFNIIDQRLGKSFTAEGVKDFMQLIVQCINLSSEKRLSMSFVVIELDQILEKEMKLTTSMGEGTPTVTLGSQLFKTTR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00681 380 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 26 193 IPR047117 -
Pste9g00681 380 SUPERFAMILY Protein kinase-like (PK-like) 63 352 IPR011009 -
Pste9g00681 380 ProSiteProfiles Protein kinase domain profile. 85 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00681 380 Gene3D Transferase(Phosphotransferase) domain 1 158 367 - -
Pste9g00681 380 Pfam Protein tyrosine and serine/threonine kinase 89 345 IPR001245 GO:0004672|GO:0006468
Pste9g00681 380 ProSitePatterns Protein kinases ATP-binding region signature. 91 113 IPR017441 GO:0005524
Pste9g00681 380 Gene3D Phosphorylase Kinase; domain 1 46 157 - -
Pste9g00681 380 FunFam Protein kinase superfamily protein 49 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00681 Pste-Chr9 3475587 3480898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00681 72 365 Trihelix Transcription Factor Family AT5G38560 35.220 7.89e-46 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pste9g00681 PK_Tyr_Ser-Thr 2.6e-28 CL0016