Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00661 ATGAGAAAGCGCCAAGTAGTTGTGAGAAGAGAAGAGCCTCAAAGAAGTGTTAGGAGTGTGAAATATGGAGAGTGCCAGAAGAATCATGCAGCCAACGTTGGTGGGTATGCTGTTGATGGTTGCAGAGAGTTTCTTGCGAGTGGTGGAGAAGGAACAAGTGCTGCTCTCACTTGTGCAGCGTGTGGCTGCCACAGGAACTTCCACAAAAGACAGAATTATGTATGTTCTGGAGGAGTAAGTAGTAACTTATTTGATGATGATTTTGAGGTTGATGTGTGTAAAGAGAAAAAGGCCAAGGCAATCACAGTTGTCAGTTTCAAATTTGAGGAGGAAATTAAATTGGTTTTTGTTTTTGGTTCTCTAATCAATTTCTTTGTCTTTTCGTGGGATGCTGATTTTGATTCCATTCCAGATCATATCACTTGA 426 0.4108 MRKRQVVVRREEPQRSVRSVKYGECQKNHAANVGGYAVDGCREFLASGGEGTSAALTCAACGCHRNFHKRQNYVCSGGVSSNLFDDDFEVDVCKEKKAKAITVVSFKFEEEIKLVFVFGSLINFFVFSWDADFDSIPDHIT 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00661 141 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 16 73 - -
Pste9g00661 141 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 71 IPR006456 -
Pste9g00661 141 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 21 71 IPR006456 -
Pste9g00661 141 Pfam ZF-HD protein dimerisation region 20 72 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00661 Pste-Chr9 3357056 3357914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00661 1 71 Zinc finger-homeobox gene family AT3G28917 67.470 3.06e-31 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pste9g00661 ZF-HD_dimer 1.4e-28 No_clan