Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00653 GCAAAACCAAAGCAACAAGAGATCTTAGAGGGAGAATAGCATAGAGTTGTGAAGTAAAAGAAAAAGTTGGTACAAGGGAAAAGATGGGAAGGCCACCATGTTGTGATAAAGAAGGTGTGAAGAAAGGACCTTGGACTCCTGAGGAAGACATCATTTTGGTGTCTTATATTCAGGAACATGGTCCTGGCAATTGGAAGGCTGTTCCTGCCAATACTGGGTTGTCAAGGTGCAGTAAGAGTTGTAGACTTAGATGGACTAATTACCTCAGGCCAGGAATCAAAAGGGGTAACTTTACAGACCAAGAGGAGAAGATGATAATCCATCTTCAAGCACTTTTAGGGAACAGATGGGCTGCCATAGCTGCTTACCTACCACAAAGAACAGATAATGATATAAAGAACTATTGGAACACCTATTTGAAAAAGAAGTTGAACAAATTGGAAAAAGGTTCTGAAGGGAACTTGGGACGTATTGGGGTTGCAGTTTCTCAGCAAATGTCTAGAGGCCAGTGGGAAAGAAGGCTTCAAACAGATATTCACATGGCAAAGAAAGCACTTAGTGAAGCTCTCTCACCAAACAAGGCCTCTACTTTGTTAGCTGGTCAATCAAATTCAAACCTCTCCAATGATAATGGCTCCTTCTACAATCCCACTAAACCAACACAATCAATATGCTATGCTTCAAGTGCTGAGAACATAGCTCGTTTGCTTAAGGGGTGGATGAAAAACACACCAAAAGCATCACGTGCTGCCTCAGCTGTGACTCAAAATTCCTTCATCTACAATAACTTGGCTGGTGCAGGAGCTGACACTGCTTCTAGTGAAGGCACAACAAAGGAAAGTGCAAGCAGTGCTGAATTGTCTGATAGTTTTGAATCCTTGTTTGGTTATGAGTCTTTGGATTCTTCAAATAATTCAGAGTTTTCACCATCTCTTTCTCCTGAGGCTACTCTTTTCCAAGATGAGAGCAAGCCAGATACTGCTGGAATAGACATGCCTTTCTATATGCTTGAGAAATGGCTTCTAGATGATGCTGCTTGTCAAGAGAAACTTTGCTTCTAGAAATTAATTAGTTCAATTTTATGCTTTTTCTTAGTTGTAGGAGATCAAGTTGAATCTCACTTTGGCCTTCATTGGCTCTAGAAGTGTATATTCCAATCCAATATTAAC 1169 0.4072 MGRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPANTGLSRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLNKLEKGSEGNLGRIGVAVSQQMSRGQWERRLQTDIHMAKKALSEALSPNKASTLLAGQSNSNLSNDNGSFYNPTKPTQSICYASSAENIARLLKGWMKNTPKASRAASAVTQNSFIYNNLAGAGADTASSEGTTKESASSAELSDSFESLFGYESLDSSNNSEFSPSLSPEATLFQDESKPDTAGIDMPFYMLEKWLLDDAACQEKLCF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00653 325 Gene3D - 68 127 - -
Pste9g00653 325 CDD SANT 16 61 IPR001005 -
Pste9g00653 325 Gene3D - 13 66 - -
Pste9g00653 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste9g00653 325 CDD SANT 69 111 IPR001005 -
Pste9g00653 325 FunFam MYB-related transcription factor 13 66 - -
Pste9g00653 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste9g00653 325 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pste9g00653 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste9g00653 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pste9g00653 325 SMART sant 66 114 IPR001005 -
Pste9g00653 325 SMART sant 13 63 IPR001005 -
Pste9g00653 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste9g00653 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Pste9g00653 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00653 Pste-Chr9 3300466 3301985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00653 1 318 MYB Transcription Factor Family AT5G62470 50.278 4.12e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g00653 Myb_DNA-binding 3.8e-16 CL0123