Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00646 TACAAACACAACCTCTTCTCAACACCAAAGTCATCGTGGTTTTGGTACAAATTCACACACTTTCTCATTAGAGCAAATCCTAAAAGGGTGGCAGAAGCTTTGAAAACAGAAACCTTCTTGGGAGGCACATAACATGGCCTTGGACTAAGCAAATTTGTAAACACTGCTGAAGCTTCTTAAAGATATTAGAGCAAGTGTTGACATCTTGAAGTTCTCTCTATTTATATTTGCATTTGGTTCTTGGACAATAAATTCTTAAAGAGAGAGTGAATATGGAGGAGAGGAATGAGATGGAAAGGGTTGATGATGTGATGCCTGGCTTTCGTTTTCACCCCACTGATGAAGAGCTTGTTGATTTTTATCTCAAGAGAAAAATTCAGCAGAAGTCTCTTCCCATTGAACTCATTAAGCAAGTGGATATTTACAAATATGATCCATGGGACCTTCCAAAGCTGGCAGGTACTGGTGAGAAAGAGTGGTATTTCTACTGTCCAAGGGACAGAAAGTACAGGAACAGTGCACGTCCAAATAGAGTCACAAGAGCTGGGTTTTGGAAAGCCACTGGAACTGACAGGCCTATATATTCCTCTGAAGGAAAGTGCATTGGTTTGAAGAAGTCTCTTGTGTTCTATAGAGGCAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAGTTTAGGATGCCTTGCATATCAGACTCATCCCCTCCCAAAAAACTCTCAGACAAAAGCTTCCCTCCAAGTGATTCATGGGCAATCTGTAGGATATTCAAGAAAACCAACTCCATCTCCATGGCACAGAAAGCTTTATCTCACCCTTGGATCTCTCAGTTACCTGGAAGCATAATATCTGACATGTTCACACAGGGTGCAACAAACCATCAGCTAGGATCACCAGCCATTCAGTTCTGTGGTGACAAGCAAGAGTTACACCAAGTATCTAATCAAGCCATCATCACCAACTTCTCAGCTTCAGATATTCCCACATACAAACCCATCAACAGCAGCACAGTTTCCAAGCCATCACCACAAATTCCTGTTTCAGATGGAGACCTTGCTGACAACTTCATATTCTACTCAGGGCCCACCAAGTGCACACTTGATGCCACTTCCATGCTTTCTCCCAACCCTGACTATGTAGCATTTGAAGAGCCAAGCCAACAACAGTACAGTGACTTCTCAATCAATCTACCTCATGACATGCAACAAAACATTAGCACAGAAACAGGAACAAAAGAACAAGATTGGGAAACAATTGGGAGAACCACTGGATTTCCCTTTAGTTTGTCTCCTCCATATGATGCTTGGAAGGCTTCTTCTGTTGCATGGGACTCACCTCCTTGCCCCAGTGAAATGTCCACTACCTATTCCACCAATAAATGCTACACTTGATTAATTAATTAACCAAATTGAGGCCATTAATTATTCATGGTGTGATCTGGCACTTGCAATAGAAGGCTTGTTAGTAGTTACCATTTTTACAATTTTAGTATATTTACCACTAAAATCAATACCATTAGGTACTGATTTTACTTGTAAATGTACAAGTGCTATCATTGTTTCGTTGTTCATATTTATATGTATCAGAATGTAACTACCCCTGGAAACATAGAAAAGAGCCACAAGTTTTATAAATGATGTGCTGGGAAAATAGATTCTTATCATGTTAGTTTTTTGTGTGACAGAGTCATGTGAGGGAAAAAACTAGGCACAAAGACTTCAAGGTATTATGAAAATTTGTGGGATCATAGTCCATGTGTCTATCTTTTTTATTCACGTGATTTTGTCATTTGAAAAACTCTCTTGGAATGATTCATTTTTGGAGCGGGGAGACACTTTGTAGTTTCGAGGAGGTTTGCTTAGTTATTTGCATTTATGCCATGATGTACTTCATATATTCACCTACTTGTGCATATAGTTTC 1927 0.398 MEERNEMERVDDVMPGFRFHPTDEELVDFYLKRKIQQKSLPIELIKQVDIYKYDPWDLPKLAGTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRMPCISDSSPPKKLSDKSFPPSDSWAICRIFKKTNSISMAQKALSHPWISQLPGSIISDMFTQGATNHQLGSPAIQFCGDKQELHQVSNQAIITNFSASDIPTYKPINSSTVSKPSPQIPVSDGDLADNFIFYSGPTKCTLDATSMLSPNPDYVAFEEPSQQQYSDFSINLPHDMQQNISTETGTKEQDWETIGRTTGFPFSLSPPYDAWKASSVAWDSPPCPSEMSTTYSTNKCYT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00646 374 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Pste9g00646 374 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
Pste9g00646 374 Gene3D NAC domain 22 175 IPR036093 GO:0003677|GO:0006355
Pste9g00646 374 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 271 - -
Pste9g00646 374 FunFam NAC domain-containing protein 35 22 173 - -
Pste9g00646 374 ProSiteProfiles NAC domain profile. 13 170 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00646 Pste-Chr9 3264148 3267083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00646 2 186 NAC Transcription Factor Family AT5G39820 68.500 5.05e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste9g00646 NAM 5.6e-37 No_clan