Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00632 GTTAAACCAAACCACTCACACTATAAAACCACACTTCACACCTCTCTCTCTTCCCAAACTATTGTTCTCACACTTCCTTTGACCACTGTCCAACAACACTCACACACACTCTCACTCTCTTAACTTCCTTTGCTCTTTCTACCCAACCAAGTTACAAAACCAAAAACGATATTGACACTGCAAAAAAGAGAGTATATAGCAAAAGGGGTGGTTGTTGTTGTTGTTTCAGATCCCCTTCATTCAATGTCCAGAAAAAGTCACATTACACACCCCACTAGGCCTAGATCTCCTTGTTCATGGCATTGAGCCACGGGTCACTTTAAAAATCCTATTTTGTTCTCACCCTTTTGTTCTTGTCACTTCAGAGCCCGTGTTTCATAGTTGGGGTGCTGTGACTTGCTCTCATGGCTGAAGCTGCAGAGCCTAAAGCATTGCCTGAGGCAGAGAAGAAGAAGGAGCAGACTTTACCCTTTTACAAGCTCTTTTCATTCGCAGACAAGTGTGATTGGATACTCATGATCTCTGGCAGCATAGGAGCCATTGTTCATGGTTCATCCATGCCAGTTTTCTTTCTTCTCTTTGGTGAAATGGTTAATGGCTTTGGCAAAAACCAAATGGACTTGAAGAAAATGACAGAAGAAGTATCAAAGTATGCTCTCTATTTCGTGTACCTTGGCCTTGTTGTTTGCATATCATCCTATGCAGAAATTGCATGTTGGATGTACACTGGGGAGAGGCAAGTGAGCACACTGAGAAAGAAGTACTTGGAAGCAGTGCTTAAACAGGACGTTGGTTTCTTTGACACGGATGCAAGAACAGGAGATATTGTTTTCAGTGTCTCCACAGATACTCTACTAGTTCAAGATGCTATAAGCGAGAAGGTGGTTGGGAACTTTATACACTATCTATCAACATTTCTGGCGGGTCTAGTGGTTGGTTTTGTGTCAGCATGGAGGCTAGCACTTCTGAGTGTTGCAGTGATTCCTGGGATTGCTTTTGCTGGTGGCTTGTATGCTTACACACTCACTGGCCTTACATCAAAGAGTCGTGAATCTTATGCAAATGCTGGCATCATAGCAGAACAGGCCATTGCTCAAGTTAGAACTGTTTACTCTTATGTCGGTGAGAGCAAGGCACTGAATTCTTATTCTGATGCAATACAAAACACACTAAAGCTTGGATACAAGGCTGGAATGGCCAAGGGTTTAGGCCTAGGATGCACATATGGAATAGCATGCATGTCTTGGGCACTGGTTTTCTGGTATGCTGGAGTTTTCATCAGGAATGGACAGACAGATGGTGGCAAGGCATTCACGGCTATTTTCTCAGCCATTGTTGGTGGCATGAGTTTAGGACAGTCATTTTCAAATTTAGGTGCTTTCAGCAAAGGCAAAGCAGCTGGATACAAATTAATGGAGATCATCAAACAGAAACCAACCATAGTGGAAGATACATCAGAAGGAAAGAGCTTAGCTGAGGTTAATGGCAACATTGAATTTAAGGATGTTACATTCAGCTACCCTTCAAGGCCTGATGTTTTTATCTTTCGCAATTTCTCAATCTTTTTCCCCGCTGGAAAAACTGTTGCGGTTGTTGGTGGTAGTGGATCCGGAAAGAGCACAGTTGTTTCCTTAATAGAAAGGTTCTATGATCCAAATGAAGGTCAGGTTCTGCTCGATAATGTGGATATTAAGACACTACAACTAAAATGGTTACGCGATCAAATTGGGTTGGTGAATCAAGAACCTGCACTCTTTGCAACTACCATTCTTGAGAATATACTCTATGGAAAACCTGATGCAACAATGGCTGAAGTGGAAGCTGCTACTTCTGCTGCAAATGCTCATAGCTTTATCACCTTGCTTCCTAATGGCTATAACACCCAGGTAGGAGAGCGAGGAGTTCAATTATCTGGGGGCCAAAAACAGAGAATTGCTATTGCTAGAGCTATGCTGAAAAATCCAAAGATCCTTCTATTAGATGAAGCAACTAGTGCCCTTGATGCAGGGTCTGAAAGCATTGTTCAAGAGGCACTAGACAGGCTCATGGTTGGAAGAACAACCGTGGTTGTTGCGCATCGCCTATCAACCATAAGGAATGTGGATACCATTGCAGTTATACAACAAGGCCAAGTTGTTGAGACAGGTACACATGAAGAACTCATTGCCAAGGCAGGCACCTATGCTTCACTCATCCGGTTCCAAGAAATGGTTGGAAATAGAGACTTCTCCAACCCATCAACTCGCAGAACACGGTCATCGCGGTTGAGCCATTCATTATCAACAAAGTCCTTAAGCCTCAGGTCTGGAAGCTTGAGGAACTTGAGCTACCAGTATAGCACTGGAGCTGATGGCCGCATTGAGATGATATCAAATGCTGAAACAGATAAGAAAAATCCTGCGCCAGATGGATATTTCTGCAGGTTGCTCAAGTTGAATGCTCCTGAGTGGCCTTACTCAATCATGGGAGCGGTTGGTTCTGTTCTTTCTGGATTCATTGGCCCTACTTTTGCTATTGTTATGAGCAACATGATTGAGGTCTTTTACTTTAAAAATTATGCATCCATGGAGAGGAAGACCAAGGAGTATGTCTTCATTTACATCGGTGCTGGTCTTTATGCAGTTGGTGCATACTTGATACAACATTACTTCTTTAGTATCATGGGAGAAAACCTCACTACAAGGGTCAGAAGAATGATGCTTGCCGCTCGCCTTGCCACAGATGCAGCTGATGTCAAGTCTGCCATTGCTGAGAGGATATCAGTGATTCTGCAGAACATGACATCTCTCCTTACTTCTTTCATAGTTGCTTTTATAGTGGAATGGAGGGTTTCCTTGCTCATCTTGGCAACCTTCCCTCTCCTCGTTCTAGCAAATTTTGCTCAGCAACTATCTCTAAAAGGGTTTGCTGGAGACACAGCCAAGGCTCATGCAAAGACAAGTATGATAGCAGGAGAGGGAGTGAGCAACATCAGAACAGTTGCAGCATTTAATGCTCAAAACAAGATGTTATCAGTGTTTTGCCATGAGCTTAGAGTGCCTCAGCGCCAGAGCCTGCGCCGGAGCCAAATGTCTGGCTTCTTGTTTGGCCTCTCTCAGCTTGCCCTTTATGCCTCTGAGGCTCTCATTCTATGGTATGGTGCACATTTGGTGAGCAAAGGTGTTTCAACCTTCTCAAAAGTCATCAAGGTGTTTGTTGTGCTAGTGATCACTGCAAATTCAGTGGCTGAAACAGTGAGCCTTGCACCAGAGATTATTCGTGGTGGTGAAGCTGTTGGTTCAGTGTTCTCTATCCTCGATCGCTCAACAAGAATTGACCCTGATGATCCTGATGCTGAGCCGGTTGAGTCGCTTCGTGGGGAGATTGAGCTTAGACATGTTGATTTTGCATACCCTTCTAGGCCTGATGTAATGGTATTTAAGGATATGAACCTTAGGATTCGTGCAGGTCAGAGCCAGGCTCTTGTGGGAGCTAGTGGTTCAGGGAAGAGTTCTGTTATTGCATTGATTGAGAGATTCTATGACCCTATTGCTGGGAAAGTGATGGTTGATGGAAAGGACATTAGGAAGCTGAACTTGAAGTCTTTGAGGCTTAAGATTGGGTTGGTGCAGCAAGAGCCAGCACTTTTTGCAGCAAGCATTTTTGAGAACATTGCATATGGGAAAGATGGTGCAACTGAAGCTGAGGTGATTGAGGCTGCACGTGCAGCCAATGTGCATGCATTTGTGAGTGGTTTGCCTGAGGGTTACAAGACACCTGTTGGTGAGAGAGGTGTGCAACTCTCAGGAGGGCAAAAGCAAAGGATTGCTATTGCAAGGGCTGTGCTTAAGGATCCTACAATTCTTCTACTAGATGAGGCCACAAGTGCACTAGATGCTGAGTCTGAGTGTGTGCTACAAGAGGCCTTGGAAAGGCTAATGAGGGGTCGCACCACAGTGCTTGTGGCTCATCGTTTGTCAACCATTAGAGGGGTTGATTGCATTGGAGTGGTTCAAGATGGGCGCATTGTTGAGCAAGGTAGCCATTCTGAACTCGTCAGCAGGCCTGAGGGAGCATATTCTAGACTTTTGCAGCTACAACATCATCACATATGAGAGATTATTTTTTATTTGATATAATATGACCTTGTGGGGGTGATAATTATGTTTGGGTCCTATTAACCTCATGCTTTGGTTTTCCTTTTTTAGATGTAGATATGTGGGATATGAGGTTTGCACCTTGAGGACAAAGTGATCTATTTCCAATGGGTTATTAATTATTATATTTAATCACAAGCCAATGGTTC 4285 0.4383 MAEAAEPKALPEAEKKKEQTLPFYKLFSFADKCDWILMISGSIGAIVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTEEVSKYALYFVYLGLVVCISSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDTSEGKSLAEVNGNIEFKDVTFSYPSRPDVFIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEAATSAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELIAKAGTYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYFCRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYFKNYASMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKMLSVFCHELRVPQRQSLRRSQMSGFLFGLSQLALYASEALILWYGAHLVSKGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRSTRIDPDDPDAEPVESLRGEIELRHVDFAYPSRPDVMVFKDMNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIAGKVMVDGKDIRKLNLKSLRLKIGLVQQEPALFAASIFENIAYGKDGATEAEVIEAARAANVHAFVSGLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPEGAYSRLLQLQHHHI 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00632 1229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 989 1223 IPR003439 GO:0005524
Pste9g00632 1229 SUPERFAMILY ABC transporter transmembrane region 25 348 IPR036640 GO:0005524|GO:0016020
Pste9g00632 1229 SMART AAA_5 390 576 IPR003593 GO:0016887
Pste9g00632 1229 SMART AAA_5 1014 1200 IPR003593 GO:0016887
Pste9g00632 1229 CDD ABC_MTABC3_MDL1_MDL2 987 1225 - -
Pste9g00632 1229 PANTHER ABC TRANSPORTER B FAMILY 4 738 IPR039421 -
Pste9g00632 1229 Pfam ABC transporter transmembrane region 766 936 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00632 1229 Pfam ABC transporter transmembrane region 43 313 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00632 1229 CDD ABC_6TM_Pgp_ABCB1_D1_like 38 336 - -
Pste9g00632 1229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Pste9g00632 1229 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 970 - -
Pste9g00632 1229 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 952 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00632 1229 FunFam ABC transporter B family member 1 25 363 - -
Pste9g00632 1229 Gene3D - 361 624 IPR027417 -
Pste9g00632 1229 SUPERFAMILY ABC transporter transmembrane region 667 966 IPR036640 GO:0005524|GO:0016020
Pste9g00632 1229 Gene3D - 978 1228 IPR027417 -
Pste9g00632 1229 Pfam ABC transporter 382 530 IPR003439 GO:0005524
Pste9g00632 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 600 IPR027417 -
Pste9g00632 1229 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524|GO:0016887
Pste9g00632 1229 Gene3D ABC transporter type 1, transmembrane domain 85 961 IPR036640 GO:0005524|GO:0016020
Pste9g00632 1229 FunFam ABC transporter B family member 19 954 976 - -
Pste9g00632 1229 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00632 1229 FunFam ABC transporter B family member 19 977 1226 - -
Pste9g00632 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 976 1225 IPR027417 -
Pste9g00632 1229 Pfam ABC transporter 1006 1154 IPR003439 GO:0005524
Pste9g00632 1229 ProSitePatterns ABC transporters family signature. 1126 1140 IPR017871 GO:0005524|GO:0016887
Pste9g00632 1229 CDD ABC_MTABC3_MDL1_MDL2 363 600 - -
Pste9g00632 1229 FunFam ABC transporter B family member 19 353 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00632 Pste-Chr9 3185333 3195392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00632 2 1225 Calmodulin-binding Proteins AT2G36910 52.964 0.0 1319