Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00623 AAATGTAAGATTCTGCTCTTTGTAGCTGTGTTTCCATTTTCATCCTTTTCTTCTCCTCCAAAAACACTAATCATCCATACCCAACTAAAGCACAAAACAGAAAACACAAAACACAAAACACAAAACACACTCTCTTTCTCTTTCTGTTTCTGTCTCTCTTCATTTCATTTCATTTCACATTTCAGAGTCAGAGCTCCAATGGCGACGAGGTACTGGATAGTGTCTCTCCCCGTTCAAAATTCCGCATCCACTCTTTGGAACAATTTGCAGGAACAAATCTCCAAACACTCCTTCGATACTCCTCTTTACAGATTCAACATTCCCAATCTCCGCGTCGGAACCCTAGACTCTCTCCTCTCCCTCAGCGACGATCTCGTCAAGTCGAACAGTTTCGTGGAGGGAGTGTCGCACAAGATCAGGCGGCAGATTGAGGAGCTGGAGCGAGTGTCGGGCGTGGTGAGCAGTGGTTTGTCGGTGGATGGGGTTCCGGTTGATTCGTACTTGACGAGGTTTGTTTGGGATGAAGCTAGGTACCCTACTATGTCGACGTTGAAGGAGATTGTGGATGGGATTCATGCTGTCCGTGATCTTTCCAACTTGGTAAAACCCGAGGATATTATAACTTCAGAAAATTTAACTACCCTTCTTGCAATTGTTCCCAAGTATTCACAGAAAGATTGGCTCTCAAGCTATGAAACATTGACAAACTATGTAGTTCCCAGGTCTTCCAAGAAGTTGTATGAGGACAATGAATATGCTCTTTATACTGTAACACTCTTCAGTCGTGTTGCAGACAACTTTAGAACTAGTGCACGGGAAAAAGGGTTCCAGATTCGTGATTTTGAATACAGTCTAGAATCACATGAGAGTGGGAAACAGGAGTTGGAGAAATTGATGGAAGATCAGGAGAGTTTGAGGGGTTCTCTATTGCAGTGGTGTTATACCAGTTATGGAGAGGTCTTCAGCTCCTGGATGCACTTTTGTGCAGTACGTGTATTTACTGAGAGCATTCTGAGATATGGTCTTCCCCCATCTTTCTTGGCATGTGTTTTAGCTCCATCAGTCAAAGCTGAGAAGAAAGTACGTTCTGTCCTAGAAGGATTGAGTGATAGCACAAACAGTGCTTACTGGAAGACAGAGGATGAAGGAGCTGTGGTCGCTGGCCTAGCAGGTGATTCTGATTCCCACCCTTATGTCTCCTTCACTATCAACCTTGCTTGAGTGCCCCCAGAAACAAGCAGTGTCTCGTTTCAGGATCTGCAAAGGATTCCTTTGTACATTAGGGTTATGTTCCATTCTTTTTTATTTTTTTATATATAATTATTAATTACATAATTTGAGCGCATTCAAGTTTCCAGAATGATCTGGTGAATTTAAGTGTAGTTTTGTGGTACCAAGTTTTGATAATTAGCAACTTGTATGTTGATTTGTTTCATTGTGTTTGATCGTCTGTGATTATGGGACTCGAGAAGGTAGAATTTCCTGTTAGAATATTTACGAATACGAAATAATGTGTGATTGTATCTATATATATAATGGATTGGCCTTGGGATTAATCTGTGGGAACTGCTGATTAGGTGAAGCTTTTCAGTCAAGTTT 1599 0.4165 KCKILLFVAVFPFSSFSSPPKTLIIHTQLKHKTENTKHKTQNTLSFSFCFCLSSFHFISHFRVRAPMATRYWIVSLPVQNSASTLWNNLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLVKSNSFVEGVSHKIRRQIEELERVSGVVSSGLSVDGVPVDSYLTRFVWDEARYPTMSTLKEIVDGIHAVRDLSNLVKPEDIITSENLTTLLAIVPKYSQKDWLSSYETLTNYVVPRSSKKLYEDNEYALYTVTLFSRVADNFRTSAREKGFQIRDFEYSLESHESGKQELEKLMEDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRVFTESILRYGLPPSFLACVLAPSVKAEKKVRSVLEGLSDSTNSAYWKTEDEGAVVAGLAGDSDSHPYVSFTINLA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00623 406 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 193 405 IPR004907 GO:0033180|GO:0046961|GO:1902600
Pste9g00623 406 FunFam V-type proton ATPase subunit C 194 282 - -
Pste9g00623 406 Coils Coil 403 406 - -
Pste9g00623 406 Pfam V-ATPase subunit C 71 192 IPR004907 GO:0033180|GO:0046961|GO:1902600
Pste9g00623 406 Pfam V-ATPase subunit C 194 399 IPR004907 GO:0033180|GO:0046961|GO:1902600
Pste9g00623 406 SUPERFAMILY Vacuolar ATP synthase subunit C 66 405 IPR036132 GO:0015078|GO:0033180|GO:1902600
Pste9g00623 406 Gene3D - 176 298 - -
Pste9g00623 406 Coils Coil 285 305 - -
Pste9g00623 406 CDD V-ATPase_C 71 403 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00623 Pste-Chr9 3121740 3128540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00623 67 406 Primary Pumps ATPases(2) AT1G12840 73.333 0.0 577