Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00613 ATGTCATTTTTGGAGGAAGAGTTTCGTTTGTTGATGGAAGAACCAAGAAACCAACACAAGCAAGATGCAAAGGGAAAACAACACGTGGCGGAGTCCTCAGAGTCTGAGCCACCTGCAGAAACGGTTATAGAGTACCCGGGTTATACGGAAGAAACGATCACGAATCTGAGCAACATCGCCAAGGCAATGATTGAAGGCGGTTACGAGAACGAGTGCTGCCAGGTCTACGCGATTTCGCGGAGGCACGCGTTTGAGGACGCTATGCACCACATTCTAGGGTACGACAAGATCAGCATCGACGAGGTGCAGAGAATGCCGTGGGAATCACTGGAGCGCGAGATTCCCACGTGGATCAACACGTGGAAAGAATGCACCTCCGTGTGGTTTCCCGGCGAGAAGAGGCTCGCCGCATCAGTATTAGCCGAAGTTGCTAACACTGCGACGAGCCTCTACGGCATCCTCTCGCGCGGAATTCTGATCCCTCTTTGA 489 0.5235 MSFLEEEFRLLMEEPRNQHKQDAKGKQHVAESSESEPPAETVIEYPGYTEETITNLSNIAKAMIEGGYENECCQVYAISRRHAFEDAMHHILGYDKISIDEVQRMPWESLEREIPTWINTWKECTSVWFPGEKRLAASVLAEVANTATSLYGILSRGILIPL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00613 162 MobiDBLite consensus disorder prediction 14 39 - -
Pste9g00613 162 Gene3D Exocyst complex component Exo70 1 162 - -
Pste9g00613 162 SUPERFAMILY Cullin repeat-like 1 155 IPR016159 -
Pste9g00613 162 MobiDBLite consensus disorder prediction 14 33 - -
Pste9g00613 162 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 149 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00613 Pste-Chr9 3053387 3053875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00613 1 160 EXO70 exocyst subunit family AT5G13990 35.000 1.92e-31 116