Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00564 ATGGTTCTGACACTCTGTGGTAATGGGTGTGGCTTCTATGGTTCTGCGACCAACAAGAACCTTTGTTCAAAATGTTACAAAGATTTTCTCAAAGAACACATCATCAAATCAAAGGAGTGTGAAGCAAAGAACTTGAATGACCAAGTGTTTGTTCGTGATCAGTCACCTAATTCTGGCAAACCATATGGTTCCAAAGATTCTGAGAGAATAAATAACAAGAGAAAGAATTGCACAAGTTGCAACAAAAAGGTTGGGCTATTAGGGTTCGAGTGTCGTTGTGGGAACGTGTTTTGTGGGACACATAGATACCTAGAGGAACATGCATGCAAAGTGGATTTCAAGGAAATTGGTCGTCAAACTTTGGTTAAACAAAATCCTTTATGTATTGTTGATAAATTACAACCTAAGATTTAG 414 0.3792 MVLTLCGNGCGFYGSATNKNLCSKCYKDFLKEHIIKSKECEAKNLNDQVFVRDQSPNSGKPYGSKDSERINNKRKNCTSCNKKVGLLGFECRCGNVFCGTHRYLEEHACKVDFKEIGRQTLVKQNPLCIVDKLQPKI 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00564 137 PANTHER AN1-TYPE ZINC FINGER PROTEIN 4 134 - -
Pste9g00564 137 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Pste9g00564 137 FunFam Zinc finger AN1-type containing 6 52 132 - -
Pste9g00564 137 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Pste9g00564 137 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 33 - -
Pste9g00564 137 Pfam AN1-like Zinc finger 77 112 IPR000058 GO:0008270
Pste9g00564 137 MobiDBLite consensus disorder prediction 51 72 - -
Pste9g00564 137 Gene3D - 51 130 IPR035896 -
Pste9g00564 137 MobiDBLite consensus disorder prediction 51 65 - -
Pste9g00564 137 ProSiteProfiles Zinc finger AN1-type profile. 69 117 IPR000058 GO:0008270
Pste9g00564 137 SMART AN1_Zf_4 77 114 IPR000058 GO:0008270
Pste9g00564 137 Gene3D - 2 49 - -
Pste9g00564 137 SUPERFAMILY AN1-like Zinc finger 64 130 IPR035896 -
Pste9g00564 137 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00564 Pste-Chr9 2863567 2863980 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00564 5 134 C2H2 Transcription Factor Family AT3G52800 35.714 8.88e-25 91.7