Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00558 ATGCACAGATTTCTCTACTCAAAGTCTAAACTTCAAGTGATACCGATCTTTCTTAGGTTTATTCCTAAGCCAAAACAACATGGTTCGACACTCTGCGCTAATGGTTGTGGCTTCTATGGTTCTGCAACTAACAAGAACCTTTGTTCAAAGTGTTACAAAGATTTTCTCAAAGAACACATCATCAAATCAAAAGAGTGTGAAGCAAAGAACTTGAATGACCAAGTGTTTGTTCGTGATCAATCACCTAATTCTGGCAAACCATGTGGTTCTAAAGATTCTGAGAGAATAAATAACAAGAGAAAGAATTGCACAAGTTGCAACAAAAAGGTTGGGTTATTAGGGTTCGAGTGTCGTTGTGGGAACGTGTTTTGTGGGATACATAGATACCCAGAGAAACATGCATGCAAAGTGGATTTCAAGGAAATTGGTCGTCAAATTTTGGTTAAACAAAATCCTTTATGTATTCTTGATAAGTTACAACGCAGGATCTAG 492 0.372 MHRFLYSKSKLQVIPIFLRFIPKPKQHGSTLCANGCGFYGSATNKNLCSKCYKDFLKEHIIKSKECEAKNLNDQVFVRDQSPNSGKPCGSKDSERINNKRKNCTSCNKKVGLLGFECRCGNVFCGIHRYPEKHACKVDFKEIGRQILVKQNPLCILDKLQRRI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00558 163 Pfam A20-like zinc finger 31 53 IPR002653 GO:0003677|GO:0008270
Pste9g00558 163 Gene3D - 23 74 - -
Pste9g00558 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 31 59 - -
Pste9g00558 163 ProSiteProfiles Zinc finger AN1-type profile. 95 143 IPR000058 GO:0008270
Pste9g00558 163 PANTHER AN1-TYPE ZINC FINGER PROTEIN 29 161 - -
Pste9g00558 163 FunFam Zinc finger AN1-type containing 6 78 158 - -
Pste9g00558 163 SMART AN1_Zf_4 103 140 IPR000058 GO:0008270
Pste9g00558 163 SMART A20_3 29 53 IPR002653 GO:0003677|GO:0008270
Pste9g00558 163 SUPERFAMILY AN1-like Zinc finger 91 155 IPR035896 -
Pste9g00558 163 ProSiteProfiles Zinc finger A20-type profile. 26 60 IPR002653 GO:0003677|GO:0008270
Pste9g00558 163 Pfam AN1-like Zinc finger 103 138 IPR000058 GO:0008270
Pste9g00558 163 Gene3D - 77 156 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00558 Pste-Chr9 2849310 2849801 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00558 31 161 C2H2 Transcription Factor Family AT3G52800 36.129 2.78e-26 96.3