Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00555 ATGCTGTCACTTTCTCTCTCTTGCCCCCCTGCCCCATTCCCCACTTTTCACATTTTCAAGCCTGCCCGAACTGCCCTCTGTGGAAAAAACTTTCCCTCTGTCACAAGCACCCTCTCCCGCTTTCCTCTTCAACACAACACCTCTCTCTCTCTCTCTTTTCACACCACCCCACTTTGCTTTGGAGTTTGGACTCAGTTCTCAACTTGTGTGCTTGGAGGGATTAGTCTTTGGCTCTTGGTTGAGAATACCTCAAAGTTTTGGAAGATGGGGTTTGGGAGTAATGCAGTTCAGGCTGGGAGTTTGGATGTGGAAAAGTCAAAGGGAAAGAAGAAGAAGAAGGAAGAAGGTGGCAAGGAGAGAAAATGGTGGTTTAGATTGAGCTTCTTTGGGAGCTGCATACCTTCTAGATCAAAAGTTGATAGCACCATAATAAATGGCTCTAGTGCCCATAATGGTGAAAATGCCAAGCCAGTGATAATTGGATCAGAGGAAAAAAAATCTGCATCAGATAAAATTACAAAAGAAACAGTTGCTCCACAAGGGATCTCTACAACAGCTAGTGATGCAGAAAGTAACTCTTCCACTCTGAAAATCAGTGAGGGATTGAAGTTTGCTTCTTGTTTGAGAAAATTTACATTCAATGGGCTTAAGGTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGGTTTGGTTGTGTGTTCAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAGACCAGGTACCGGGCTTACGGTTGCGGTCAAGACCCTCAACCACAATGGACACCAGGGGCATAAAGAATGGCTTGCTGAATTAAATTATCTTGGTGATCTTGTCCATCCTAATCTTGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAAAGATTACTGGTTTATGAGTTTATGCCCCGAGGCAGTTTGGAGAACCACCTCTTTAGAAGTACACTACTAACCTTTTTATTTCTTTGTTCACAGGCTTTTGTGCTTATAGAAAACAAAAACCAAAGACCCCTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCAGCAAAAGGTCTTGCTTTTCTCCATGAAGAGGCTCAGAAGCCCATAATTTATCGCGATTTCAAAACATCTAATATACTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCCGAGGGGGAGAAGACACATGTATCAACAAGAGTTATGGGAACATATGGTTATGCTGCTCCGGAGTATGTGATGACTGGTCATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTGCTGCTTGAAATGCTCACTGGCCGGCGATCTATTGATAAGAGAAGACCAAATGGTGAACACAATCTGGTTGAATGGGCCAGGCCAGTACTTGGAGACCGGAGAATGTTCTACCGGATAATTGATCCCCGCCTTGAAGGCCATTTCTCGGTTAAAGGGGCACAGAAGGCTGCCCAGTTGGCTGCTCAATGCCTTAGCCGTGATCCAAAATCCAGACCCTTGATGAGTGAAGTTGTTCAAGCTTTAAAGCCTTTACCAAACCTCAAGGACATGGCTATCTCATCTTATCAATTCCAGATTGCTCGAGTAGATCGAACCATGTCCATGCCTAATCATAAAAATGGTATTAGAACACAGTTAGTATCTGTACCAAGGAAGGGTCAACCTGTAAGGACATTGTCTAGTCCAAATGTTCCACATGGTTCTCCATATGTTCATTTTACCAAGTCTCCAAAACCTATTGGATAAGAATCAATGTTCACACTATCGATAATTTGATTCTCTAATCTCTATTCATTCAGTTCCCACAAATTAGGCCATCAGCTGTACATACAGCTACTGTTGTGTCTGGGAGAGTTTCTCTCAAACCTGATGAAATCATTAAAGTCTTGTCATTATATAATCTCAAATAAGTTAAGTGCACGAGACAGTTTAATTACATAGAAATAGTACTAGTAGGGACATGTCATACACACCTTTTTAGTGGGAAACTGTTATTCACTGAAATTGTTTTAAATTTTCTACCTTTTCTCGGATTTCCTTCCTTTCAGAATGTATATTTTGTGAAGAAAAAAGATGTGATAACTCGTGTTAGTCATAAATTTTTACATACTTGGACGACATACTTTCCAGTAAATACTTATTGATGTAATCAAATGTTGTACTTGGAAAATGTTTGAGTGGCCTAAAAAGCGATGAGCATGCAGGGTTCTTTTCTTTCTGGTGATCTTTTAGGGCCTCTGGTTTCTTTTTGGTGTGTCAATTGTCAAATGTGTTGATTGTTTGGAAATAGCTTTGTTGCTCTGTACAATATGAAATGGATTCTTTTCTATTGCAATTGTGTAACGTTAC 2400 0.41 MLSLSLSCPPAPFPTFHIFKPARTALCGKNFPSVTSTLSRFPLQHNTSLSLSFHTTPLCFGVWTQFSTCVLGGISLWLLVENTSKFWKMGFGSNAVQAGSLDVEKSKGKKKKKEEGGKERKWWFRLSFFGSCIPSRSKVDSTIINGSSAHNGENAKPVIIGSEEKKSASDKITKETVAPQGISTTASDAESNSSTLKISEGLKFASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVRPGTGLTVAVKTLNHNGHQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRSTLLTFLFLCSQAFVLIENKNQRPLPLPWSIRMKIALGAAKGLAFLHEEAQKPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKRRPNGEHNLVEWARPVLGDRRMFYRIIDPRLEGHFSVKGAQKAAQLAAQCLSRDPKSRPLMSEVVQALKPLPNLKDMAISSYQFQIARVDRTMSMPNHKNGIRTQLVSVPRKGQPVRTLSSPNVPHGSPYVHFTKSPKPIG 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00555 598 CDD STKc_IRAK 229 528 - -
Pste9g00555 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Pste9g00555 598 PANTHER OS01G0588500 PROTEIN-RELATED 180 528 - -
Pste9g00555 598 FunFam Serine/threonine-protein kinase BIK1 190 308 - -
Pste9g00555 598 MobiDBLite consensus disorder prediction 567 598 - -
Pste9g00555 598 Gene3D Phosphorylase Kinase; domain 1 207 308 - -
Pste9g00555 598 ProSitePatterns Protein kinases ATP-binding region signature. 229 261 IPR017441 GO:0005524
Pste9g00555 598 Pfam Protein tyrosine and serine/threonine kinase 227 525 IPR001245 GO:0004672|GO:0006468
Pste9g00555 598 SUPERFAMILY Protein kinase-like (PK-like) 202 525 IPR011009 -
Pste9g00555 598 FunFam Probable serine/threonine-protein kinase PBL8 309 545 - -
Pste9g00555 598 Gene3D Transferase(Phosphotransferase) domain 1 309 547 - -
Pste9g00555 598 ProSiteProfiles Protein kinase domain profile. 223 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00555 Pste-Chr9 2824785 2830737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00555 179 537 Glycoside Hydrolase AT3G07070 49.861 5.18e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste9g00555 PK_Tyr_Ser-Thr 4.2e-45 CL0016