Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00551 GCATGCTGTCCTTAAAACGCTGCCACTATAAGAGTTAGGACACATAAAGAAGCCAAAAGCAGAAGAAACGTCACACCATACATTCTGTATTTGGGTGAGAAGAAAGAAGATGAAATAAAAAAAAAACAGAGGAAGTGCTCTGTTTTCTTTGTGTGATTTCTCTGGCTGCTGTGATATTCACCTAAAGCTTGCACCTTTCTGCTGTGGATCACCTAAAACTTGGGTTTGGTTGAGATGGCTGACAAGGAAGAAGCCATGCATGCTGTTTTGAAGGAAGCTGTGGATTTGGAAAACGTGCCACTTGAGGAGGTGTTTCAGACTCTGAGGTGTAATTCGAATGGACTTACAGCAGAATCTGCTGAGGAGAGGTTGGCCATCTTTGGCCACAACAAACTTGAGGAGAAGAAGGAGAGCAAGTTTTTGAAGTTTTTGGGATTTATGTGGAATCCTCTTTCATGGATCATGGAAGCTGCAGCAATCATGGCCATTGCTTTGGCCAATGGAGGAGGAAAACGTCCTGATTGGCAAGACTTTGTTGGGATTATCACACTCCTTATTATCAATTCAACAATAAGTTTCATTGAGGAGAACAATGCTGGTAATGCTGCCGCAGCTCTGATGGCTCGTCTAGCACCTAAAGCTAAGTCAGCACTTACAGGTGAATCTCTTCCTGTCACGAAAGGTCCGGGTGATAGTGTTTATTCTGGCTCCACATGCAAGCAGGGAGAGATCAATGCAATTGTTATTGCCACTGGAGTTCATACCTTTTTTGGCAAGGCTGCTCATCTTGTGGACTCCACAAATCAAGTTGGTCATTTTCAGAAGGCAAGGGCTGGTGTTCAAGAAGTTCACTTCCTTCCCTTCAATCCAACTGACAAGAGGACTGCAATGACTTATATAGATGATGGAGGTAGAATGCATCGTGTCAGCAAAGGAGCTCCAGAGCAGATTTTGAATCTTGCACGCAATAAATCAGAGATAGAGCGTAGAGTTCACTCTGTTATTGATAAGTTTGCTGAGCGGGGCTTACGATCTCTTGCAGTTGCCTACCAGGAAGTTCCTGATGGAAGGAAAGAAAGCCAAGGAGGGCCTTGGCAATTTATTGGACTCTTGCCTCTATTTGACCCGCCTAGGCATGATAGTGCTGAGACCATAAGAAGGGCATTAAATCTTGGAGTGAATGTTAAAATGATAACAGGTGATCAACTGGCAATAGGAAAAGAAACTGGACGGCGCCTGGGTATGGGAACCAACATGTACCCTTCATCAGCTTTATTGGGCCAAAACAAGGATGAAACAATTGCTACCTTGCCAGTTGATGAATTGATTGAAAAAGCAGATGGATTTGCTGGTGTTTTTCCTGAACACAAATATGAGATCGTGAAACGCTTACAAGCTAGGAAACACATATGTGGAATGACTGGAGATGGGGTTAATGATGCCCCTGCTCTCAAAAAGGCAGATATTGGAATAGCTGTCGCCGATGCTACTGATGCAGCTCGTAGTGCTTCTGATATTGTTCTTACTGAACCTGGTCTCAGTGTTATAATCAGTGCTGTATTGACTAGTCGAGCAATATTCCAAAGGATGAAGAATTATACAATCTATGCAGTTTCCATCACAATCCGTATTGTGCTTGGTTTCATGTTACTGGCTCTCATATGGCAATTTGATTTTCCACCATTCATGGTGCTGATTATTGCTATTCTGAACGATGGTACCATTATGACAATATCAAAGGACAGGGTAAAACCATCACCATATCCAGATAGCTGGAAGTTGGCAGAGATCTTTACCACTGGAATAATTCTCGGTGGTTACTTGGCGATGATGACTGTTATTTTCTTTTGGGCAGCTTATAAAACAGATTTTTTCCCTCAAACATTTGGAGTTGCAAGTCTTCAGAAAAAGGATAGGGATGACTTTAGAAAGCTTGCCTCAGCAATATACCTACAAGTTAGCACAATTAGTCAGGCCCTCATCTTCGTAACACGGGCACGGAGCTGGTCTTATGTTGAGCGGCCGGGTTTGTTACTTGTGGCAGCTTTTGTTATTGCCCAACTGATAGCTACCTTAATTGCTGTTTATGCAAATTGGAGTTTTGCAGCTATTGAAGGGATTGGATGGGGTTGGGCTGGTGTTGTTTGGCTTTATAACCTCATCTTTTATATGCCACTTGATTTTATCAAATTCATAATTCGATATGCCTTGAGTGGAAGGGCTTGGGATCTTGTTATTGAGCAAAGGATTGCTTTTACAAGGAAAAAAGATTTTGGAAAGGAAGAACGTGAACTTAAATGGGCACATGCACAGAGGACACTCCATGGCCTTCACCCACCAGAGACTAAGATGTTCAATGAACGAACAAGTTACACAGAACTTAATCAGATGGCTGAAGAGGCTAGAAGACGAGCAGAGATTGCTAGGCTGAGAGAACTGAATACACTGAAGGGTCATGTTGAATCTGTGGTTAGACTGAAGGGCCTCGACATTGACACAATACAGCAAGCATACACTGTCTAGAATGTAGAGTTTTATGCATGAATCACGTATGTGTATAATGCCTTTAGCAGTCTGAGCATAGAGCAACCGCAAATATATACTGCTTTAAACCTACAGGACAGTTTGTCCTCCACTGAGTGCTAGTCCAAGACAATGTCTATGCACTTTATATATGTTTATGCAGGCAGTTTTGGTAGAATCTGTTCCTGTGTCTACTTTCGTAGACATGAAATTATTGGTGTATTTAATTTTTAAGTGGTT 2763 0.4224 MADKEEAMHAVLKEAVDLENVPLEEVFQTLRCNSNGLTAESAEERLAIFGHNKLEEKKESKFLKFLGFMWNPLSWIMEAAAIMAIALANGGGKRPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMARLAPKAKSALTGESLPVTKGPGDSVYSGSTCKQGEINAIVIATGVHTFFGKAAHLVDSTNQVGHFQKARAGVQEVHFLPFNPTDKRTAMTYIDDGGRMHRVSKGAPEQILNLARNKSEIERRVHSVIDKFAERGLRSLAVAYQEVPDGRKESQGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDETIATLPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPYPDSWKLAEIFTTGIILGGYLAMMTVIFFWAAYKTDFFPQTFGVASLQKKDRDDFRKLASAIYLQVSTISQALIFVTRARSWSYVERPGLLLVAAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYMPLDFIKFIIRYALSGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHPPETKMFNERTSYTELNQMAEEARRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQAYTV 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00551 762 Gene3D - 68 139 - -
Pste9g00551 762 Gene3D - 174 188 - -
Pste9g00551 762 Gene3D - 434 627 - -
Pste9g00551 762 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 192 302 IPR023299 GO:0000166
Pste9g00551 762 PANTHER CALCIUM-TRANSPORTING ATPASE 137 197 - -
Pste9g00551 762 Pfam haloacid dehalogenase-like hydrolase 225 410 - -
Pste9g00551 762 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Pste9g00551 762 Coils Coil 713 733 - -
Pste9g00551 762 NCBIfam HAD-IC family P-type ATPase 371 485 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00551 762 FunFam Plasma membrane ATPase 290 444 - -
Pste9g00551 762 Pfam E1-E2 ATPase 137 196 - -
Pste9g00551 762 Gene3D - 297 433 IPR023214 -
Pste9g00551 762 Gene3D - 140 173 - -
Pste9g00551 762 FunFam ATPase 4 plasma membrane-type 381 627 - -
Pste9g00551 762 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 659 IPR023298 -
Pste9g00551 762 Gene3D - 711 762 - -
Pste9g00551 762 SUPERFAMILY Calcium ATPase, transduction domain A 137 186 IPR008250 -
Pste9g00551 762 Gene3D - 194 296 IPR023299 GO:0000166
Pste9g00551 762 PRINTS H+-transporting ATPase (proton pump) signature 368 384 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00551 762 PRINTS H+-transporting ATPase (proton pump) signature 572 593 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00551 762 PRINTS H+-transporting ATPase (proton pump) signature 253 271 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00551 762 PRINTS H+-transporting ATPase (proton pump) signature 396 412 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00551 762 PRINTS H+-transporting ATPase (proton pump) signature 427 452 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00551 762 FunFam Membrane H(+)-ATPase1 236 296 - -
Pste9g00551 762 SUPERFAMILY HAD-like 288 442 IPR036412 -
Pste9g00551 762 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00551 Pste-Chr9 2806657 2814295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00551 196 762 Primary Pumps ATPases AT3G47950 88.536 0.0 1066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g00551 9 2806657 2814295 Pste9g00551 9 2806657 2814295 ECH