Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00533 CAGCGCCGGAACCCCAACAACTATATAGCTCCCTCTTTCTCTCACTCTCACAATTCCAATCTCATTCCATCTTACAATCCACAACGCTTTTTTTCTTTCTCTCACATCACTTTCACACCTCTTTCTTCTTCTTCTTTTCTTCATAACAGTTGTGTCAAAATGCGAATGAGTTGTAACGGGTGTCGCGTCCTCCGAAAAGGGTGTAGCGAAGATTGCAGCATAAGACCGTGTTTGCAATGGATCAAAAACCCTGAGTCGCAGGCTAATGCCACTGTTTTTCTCGCCAAGTTTTACGGTCGTGCTGGACTCATGAACCTCATCAACGCTGGCCCTGAACACCTTCGACCAGCTATTTTTCGATCTTTGTTGTACGAGGCATGTGGTCGAATTGTGAACCCAATTTACGGTTCAGTGGGTTTGTTATGGTCTGGGAGTTGGCAGCTTTGTCAAGCCGCCGTTGAAGCCGTTTTGAAAGGTGAGCCGATCACGTCAATAACTTCTGAAGTCGCGGCTAACGGGCGGGCCCCACCGCTCAAGGCTTACGACATACGCCACGTGTCGAAGGATGAGAACTCGGCTAACGAAACCCCAAAGGTCAAGACCCGGTCGCGGTTCAAGCGAACCGGTGGGACAGTGATTAAACCGAAGGCAAGTAAGGGTATTGGGTTTGGTCCGGTTGAACCGGAGTCAGCGGACCGGGCTGTGAGCCACGAGTCAGGGCTGAGCCATTTGTCGGAAGCCGCGGCTATGGTGGAAGGAGAAAGCGACGTTTCTGTGGAAACTTCAAACCTATTTCATGAGGAGCCGATGGAGTCGGCTCCAAAGAGAAGCGACTTAGCCGAAGAGAATAGCAATGAAATTGGCTTGGAGTTGACGCTTGGCTTCGACTCGGCTGCACGTGATCATCACATGGTTCCAATGAAAAAGAGAAAGATAGTTGAGTTGAACAGTTGTAGTGACTCGACTAAGAAAGAGCCGTGTAAGATGGAGCTGGGGCTTGAGCTCTCGGCTTGAATAATAATGGCTCGCTTGGTTTTTGGCTTAGCCGGCTTTTTTCTCTTCAAACTTGTAGCTAAGGTGAGAGAGAGGTTTAGAGAACCGTTGTTATTTTATGTTTTTAATTTTTTTTTCTTTTTTGGGTTAATCATTGTCAATGAGGTGTTGTACAAATGTTGTTGAAATCATGATATGTAGAGGATAAAAAAGAAATCAGAAAA 1217 0.4684 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKNPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGEPITSITSEVAANGRAPPLKAYDIRHVSKDENSANETPKVKTRSRFKRTGGTVIKPKASKGIGFGPVEPESADRAVSHESGLSHLSEAAAMVEGESDVSVETSNLFHEEPMESAPKRSDLAEENSNEIGLELTLGFDSAARDHHMVPMKKRKIVELNSCSDSTKKEPCKMELGLELSA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00533 284 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Pste9g00533 284 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 240 - -
Pste9g00533 284 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Pste9g00533 284 PIRSF AS2 1 283 IPR017414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00533 Pste-Chr9 2687293 2689113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00533 1 280 AS2 family AT3G02550 58.392 4.99e-106 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste9g00533 LOB 8.2e-25 No_clan