Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00521 ATCAGTAAATTCCGTTCGCAACACGATCAATCACTATGTCTGCGATGATGGCATATTCGAGTTCCTGGAGCAGAGCTCTCGTTGCGATCTCGCCGTACACCTTCTCCGCCGTCGGAATCGCCGTCGCTATCGGCGTCTCCGTCCTCGGCGCCGCCTGGGGGATCTACATCACCGGTAGTAGCTTGATCGGCGCTGCAATCAAGGCTCCTCGAATCACTTCCAAAAATCTCATTAGTGTAATCTTCTGTGAAGCTGTTGCTATATATGGTGTTATTGTGGCTATTATTCTTCAAACAAAACTAGAGAGTGTTCCAACAAAAAGTATCTATGAACCAGAGTCTCTTAGAGCAGGATATGCAATCTTTGCCTCCGGATTAATCGTTGGCTTCGCAAATCTAGTTTGTGGGTTGTGTGTAGGAATAATTGGAAGCAGCTGTGCATTGTCTGATGCCCAGAACTCCTCTCTCTTTGTGAAAATTCTTGTAATTGAGATCTTTGGTAGCGCGTTAGGGCTATTTGGAGTTATTGTTGGAATTATTATGTCAGCTCAAGCAACATGGCCAGCGAAATAGTTTCCCCTGTATCAGAGAATGTGGTGTAGGAATGCAATTATGGTAGAGTACAATGTCTTCTGTACTGTCCTGATTAAAGTTTTCTGTGTTTCCTGTTGGTAGAAATGTAAAATCCAGCGTAATAGCTTGCCTCCATTACAACTTTAGTAGGCCGTATTATTTTCCAGTGAGTTGTTAGAAGGTCTTGTGTATCATTAGAGATATCCCCCAACCAAACGACCCCTATCTCTGGCCCCTCCACTCGACATCGACCGAGTCATAAAGATATAGCCTTCTTGCAACCATTGCTTTCGTACTTTATCTTCCCATAACCGTCACTCCCACACCTTATCTAGATCCGCAATATAGTCTGTTGGTTGAATTTCAATATTTTTGGAGGACTACTGAATCTTTCATTAATCAATAAAAAAGTGAATTTATTTGGGCTTGTGAATAAAGTCGACAAGCAGTTTTGTTGGATTGCAGGGAGATCTCAGCTGGGTTCATTGAGGTGTTAAGTGGTAGGTTATTCTGACTGTGAAGAATAATGTTGATGTTTTAATATTGGAATTCAAAAACATTTGTGATTAATAGTAATGAGCCTGAGATTATGAATGTTGGGTTCATTTGCAGGGTCCCTTTTTATTATTTTTGCCCTCTGCCCTCACAACATTGTTTATTAACCAAGTTTATATATACTATTTGTATTTGTTTTTGT 1269 0.4106 MSAMMAYSSSWSRALVAISPYTFSAVGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPTKSIYEPESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00521 178 FunFam V-type proton ATPase proteolipid subunit 21 176 - -
Pste9g00521 178 CDD ATP-synt_Vo_c_ATP6F_rpt2 105 169 - -
Pste9g00521 178 CDD ATP-synt_Vo_c_ATP6F_rpt1 23 85 - -
Pste9g00521 178 Pfam ATP synthase subunit C 110 169 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pste9g00521 178 Pfam ATP synthase subunit C 27 85 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pste9g00521 178 SUPERFAMILY F1F0 ATP synthase subunit C 19 88 IPR035921 -
Pste9g00521 178 Gene3D - 21 175 IPR035921 -
Pste9g00521 178 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 5 173 - -
Pste9g00521 178 SUPERFAMILY F1F0 ATP synthase subunit C 102 170 IPR035921 -
Pste9g00521 178 PRINTS Vacuolar ATP synthase 16kDa subunit signature 39 63 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste9g00521 178 PRINTS Vacuolar ATP synthase 16kDa subunit signature 65 89 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste9g00521 178 PRINTS Vacuolar ATP synthase 16kDa subunit signature 121 147 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pste9g00521 178 PRINTS Vacuolar ATP synthase 16kDa subunit signature 148 171 IPR000245 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00521 Pste-Chr9 2598289 2601947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00521 1 178 Primary Pumps ATPases(2) AT2G25610 87.640 6.44e-108 306