Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00509 ATGCATATTGCATCACCATTACATAATTCACTCAGTCCTTTCCTTACATCTATTCTTCTTTGTCATATTTCTCTAATTTCAGAAATGGGAAGGCCTCCTTGTTGTGACAAATCCAATGTGAAAAGGGGTCTTTGGACTCCTGAGGAAGATGCTAAAATACTAGCCTATGTAGCCAATCATGGAACTGGAAACTGGACATTGGTTCCAAAGAAAGCAGGGCTGAACAGATGTGGTAAAAGCTGCAGGCTAAGATGGACCAACTACCTAAGACCTGATCTCAAGCATGATAGTTTTACTCACCAAGAAGAAGAGCTCATTATTAACCTTCATGGAGCCATAGGAAGCAGATGGTCTTTAATTGCAAAAAGACTACCTGGAAGAACAGACAATGATGTCAAGAACTACTGGAACACAAAGCTAAGGAAGAAACTTATGAAAATGGGAATTGATCCAGTGACCCATAAGCCAGTATCACAAGTCCTCTCTGACTTGGGAAACATTAGTGTCATTCCCAACACTACTACTAACCAAATGGCTTTTGTCAACAAGGACTTGATGAGCAATATGCTACCAAGCAAAACTGAACCATCAGGTTCCAATAAATCAATGATGGAGCACACACAAGAGGTTCAAGTTCAGTCATGGGAACACCACATTCCTTACCAAGTCATCATCAACTCAGAAAATATCCAACCACATGTCTTTAGTGAAGCTGCATCCTCAACCTCATCCTCATCTTCCTCCAATCTCACACAGTTAGGTTCACCACAGTCCTACTCTTGCCAAACCCCTCAGGCTCAAATTTCCCCTCCTTGTTCCTCCTTTGATTGGAGTGAGTTTCTTCATAGTGACTCATTTATGTGGTCATTGAACCCCTCGGTTCTAACACAAAGTGAAGCTGAGCTCTCCAACAATGCCAAAAGCAATGGTCATGACAAGCAAGGAGCTGCAAGTGAGGGTTGTGGAGCTGGTGCTAGTGGAAATGCAAGCATGGAATGTCAAATTAACCATCAGTGTGAAGGTCATTCATTTGTGGATGGTATTTTGGACAAGGATAGTGAGATAAGAGCAGCATTCCCTGAACTTTTGGATGCTTCTTTTGACTACTGA 1110 0.4198 MHIASPLHNSLSPFLTSILLCHISLISEMGRPPCCDKSNVKRGLWTPEEDAKILAYVANHGTGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLKHDSFTHQEEELIINLHGAIGSRWSLIAKRLPGRTDNDVKNYWNTKLRKKLMKMGIDPVTHKPVSQVLSDLGNISVIPNTTTNQMAFVNKDLMSNMLPSKTEPSGSNKSMMEHTQEVQVQSWEHHIPYQVIINSENIQPHVFSEAASSTSSSSSSNLTQLGSPQSYSCQTPQAQISPPCSSFDWSEFLHSDSFMWSLNPSVLTQSEAELSNNAKSNGHDKQGAASEGCGAGASGNASMECQINHQCEGHSFVDGILDKDSEIRAAFPELLDASFDY 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00509 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 144 IPR017930 -
Pste9g00509 369 FunFam Transcription factor RAX3 35 95 - -
Pste9g00509 369 Gene3D - 96 159 - -
Pste9g00509 369 Pfam Myb-like DNA-binding domain 42 89 IPR001005 -
Pste9g00509 369 Pfam Myb-like DNA-binding domain 97 138 IPR001005 -
Pste9g00509 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 93 IPR017930 -
Pste9g00509 369 CDD SANT 45 89 IPR001005 -
Pste9g00509 369 ProSiteProfiles Myb-like domain profile. 37 89 IPR001005 -
Pste9g00509 369 PANTHER F14D16.11-RELATED 29 369 - -
Pste9g00509 369 SUPERFAMILY Homeodomain-like 39 136 IPR009057 -
Pste9g00509 369 ProSiteProfiles Myb-like domain profile. 90 140 IPR001005 -
Pste9g00509 369 SMART sant 41 91 IPR001005 -
Pste9g00509 369 SMART sant 94 142 IPR001005 -
Pste9g00509 369 FunFam transcription factor MYB80 97 157 - -
Pste9g00509 369 Gene3D - 35 95 - -
Pste9g00509 369 MobiDBLite consensus disorder prediction 236 265 - -
Pste9g00509 369 CDD SANT 97 140 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00509 Pste-Chr9 2560860 2562634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00509 29 369 MYB Transcription Factor Family AT3G28470 48.305 3.99e-88 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste9g00509 Myb_DNA-binding 4.5e-16 CL0123