Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00498 ATGGATCGCACCTACGCCTTTTCCTCTTCGTTGCTTCTGTTGAGCTTGTTGGGTCTTCACATCTTCTTCGTTTCGTCGCAGGTCGAGGACGACGTTAAATGTCTTCGTGGCATCAAGGAAACCCTGAAGGATCCTCAGAACCGTCTCTCCAATTGGCGGTTTGACAACACAACCGTAGGTTTCATCTGCGACTTCGTGGGTGTGTCTTGCTGGAACGCCAGGGAGAACCGTGTCTTAGGTTTGGACCTTCAAGACTTTAAGTTGTCGGGTCGGATCCCAGAGGCTTTGAAGTACTGCGGGAAGAGTCTTCAAAGGTTGGATCTTGCTTCAAATTCTTTTTCCGCAGAGATCCCACCTGAGATCTGTAGTTGGATGCCGTTTTTGGTTTCTATAGATTTGTCTGGTAATCAACTCTCTGGGCCTATTCCCCCTACAATTGTGAATTGTTCCTATTTGAATGAGTTGATTTTGTCAAATAACCAGCTTTCTGGCTCAATTCCCTTTGAGTTTGGGAGTTTAAGTAGGCTCAAGAAGTTTTCTGTGGCTAACAATAGGCTTAGTGGGACAATTCCTGACTTTTTCAATGGGTATGATAGAGAGGGTTTTGAGGGGAACAGTGGACTGTGTGGGAGTCCTCTTGGATCCAAGTGTGGTGGAATGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGGGTGTTTGGTGCTGCTGCTTCATTGTTACTGGCTTTTGGGTTGTGGTGGTGGTACCATTTGAGTGGGAAGAAGAAGAAGGGATATGCAGTTGGTGCTGTTGGTGGTGGTGGTGGTGGTGATTGGGCTGTGAGGTTAAGAGGGTACAAGCTTGTGCAAGTTAGTCTCTTTCAGAAGCCTCTTGTGAAGTTGAAGTTGGGGGATTTGATGGCTGCTACTAATAGTTTCAGTGGGGAGAATGTTCTTTTTGCAACAAGGACTGGGACAACCTATAAGGCTGATCTTCCAGATGGGTCCACGCTGGCAGTGAAGAGGTTGAGTGCTTGTAAGATTGGGGAGAAGCAGTTTGGGATGGAGATGAATCGATTGGGGCAGGTTAGGCACCCAAATTTGGCGCCACTGTTGGGGTACTGTGTTGTGGAGGAGGAGAAGCTGTTGGTTTATAAGAACATGTCAAATGGGACATTGTATTCATTGCTGCATAAGAATAGTGGGGTGTTGGATTGGGTGATGAGGTTTAGGATTGGTTTGGGCGCAGCAAGGGGGCTTGCGTGGCTGCACCATGGCTGCCACCCTCCCATTATACAGCAGAACATTTGCTCCAATGTGATTCTTGCTGATGAGGAGTTTGATGCTAGATTGATGGACTTTGGGCTTGCAAGACTGATGGCGTCGGATTCTAATGGTAGTTTTGTGAATGGGGATTTAGGGGAGCTTGGCTACATAGCGCCGGAGTATCCGAGTACCCTGGTTGCTTCATTGAAAGGGGATGTGTATGGGTTTGGTGTTTTGCTTTTAGAGTTGGCAACCGGGCGAAAACCTCTTGAGGTTTGCAATGGGGAGGAGGAGTTTAAGGGTAGCTTGGTGGATTGGGTGAATATGCATTCTAGTTCTGGTCGAATCAAGGATTGCATTGATAAAGCCTTATGTGGAAGGGGACATGATGAGGAGATTCTACAGTTTCTCAAAGTTGCATTGAATTGTGTGGTTTCTCGCCCCAAGGATAGGTGGTCTATGTACCAGGTTTATCATAACTTAAAGAGCATATCCAAAGACCAGAGTTACTTTGAACATGATGATGAATTTCCCTTGATCTTTGGCAAGCCAGAAAATGAGGTGGTGGTGTAG 1821 0.4646 MDRTYAFSSSLLLLSLLGLHIFFVSSQVEDDVKCLRGIKETLKDPQNRLSNWRFDNTTVGFICDFVGVSCWNARENRVLGLDLQDFKLSGRIPEALKYCGKSLQRLDLASNSFSAEIPPEICSWMPFLVSIDLSGNQLSGPIPPTIVNCSYLNELILSNNQLSGSIPFEFGSLSRLKKFSVANNRLSGTIPDFFNGYDREGFEGNSGLCGSPLGSKCGGMSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLSGKKKKGYAVGAVGGGGGGDWAVRLRGYKLVQVSLFQKPLVKLKLGDLMAATNSFSGENVLFATRTGTTYKADLPDGSTLAVKRLSACKIGEKQFGMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVYKNMSNGTLYSLLHKNSGVLDWVMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILADEEFDARLMDFGLARLMASDSNGSFVNGDLGELGYIAPEYPSTLVASLKGDVYGFGVLLLELATGRKPLEVCNGEEEFKGSLVDWVNMHSSSGRIKDCIDKALCGRGHDEEILQFLKVALNCVVSRPKDRWSMYQVYHNLKSISKDQSYFEHDDEFPLIFGKPENEVVV 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00498 606 ProSiteProfiles Protein kinase domain profile. 307 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00498 606 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 269 381 - -
Pste9g00498 606 Gene3D Ribonuclease Inhibitor 28 219 IPR032675 -
Pste9g00498 606 Gene3D Transferase(Phosphotransferase) domain 1 382 599 - -
Pste9g00498 606 Gene3D Phosphorylase Kinase; domain 1 269 380 - -
Pste9g00498 606 SUPERFAMILY L domain-like 27 197 - -
Pste9g00498 606 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 28 218 - -
Pste9g00498 606 Pfam Protein tyrosine and serine/threonine kinase 328 513 IPR001245 GO:0004672|GO:0006468
Pste9g00498 606 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Pste9g00498 606 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 81 579 - -
Pste9g00498 606 SUPERFAMILY Protein kinase-like (PK-like) 285 577 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00498 Pste-Chr9 2514471 2516291 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00498 29 605 Receptor kinase-like Gene Family AT3G28450 64.666 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pste9g00498 PK_Tyr_Ser-Thr 4.8e-25 CL0016