Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00496 AGGGTATGCTTTGATAATCTTGACGTGGAGAGTGTCAAGTTTATGGCTAGGGAAATCCTTGTTCTGCATAGGCTTGACCATCCAAATGTAATAAAGTTAAAAGGCTTGATAGCATCACAAACATCTCGCAGTCTATACCTTGTTAAATGCTACATGCAACAACTTCTTATTGGATTGGATCATTGCTATAGTCGTGGGGTCCTCCACTACGATATAAAGTGCTCAAATCTTCTCTTTAACAATAATGGCATCTTAAAGATTGCAGATTTTGGTTTGGCAAATTTCATTGACCCCTATCATAGGGTTACATTGACCAATCGTGTTGTTACTCTGTGGTATAGACCACCAGAACTTTTATTTGGAGCATCA 369 0.3848 RVCFDNLDVESVKFMAREILVLHRLDHPNVIKLKGLIASQTSRSLYLVKCYMQQLLIGLDHCYSRGVLHYDIKCSNLLFNNNGILKIADFGLANFIDPYHRVTLTNRVVTLWYRPPELLFGAS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00496 123 PANTHER CELL DIVISION PROTEIN KINASE 9 122 - -
Pste9g00496 123 Gene3D Phosphorylase Kinase; domain 1 4 47 - -
Pste9g00496 123 SUPERFAMILY Protein kinase-like (PK-like) 5 122 IPR011009 -
Pste9g00496 123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 67 79 IPR008271 GO:0004672|GO:0006468
Pste9g00496 123 Pfam Protein kinase domain 48 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00496 123 Gene3D Transferase(Phosphotransferase) domain 1 48 122 - -
Pste9g00496 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00496 123 SMART serkin_6 4 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00496 Pste-Chr9 2510008 2510883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00496 17 123 Core Cell Cycle Gene Families AT5G10270 42.759 2.23e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste9g00496 Pkinase 4e-21 CL0016