Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00484 ATGGGCGTGGAGCAGAACCATACTAGTGTTGACACGAAGAACAAAACTGGGTCTGTTCGATCCATTTTCATGCATGCTGATTGGTTGGATTGGTTTTTCATGGTTTTGGGTTTCTTTGGAGCCATGGGTGATGGCTTCACCACCCCTATCACCTTGTACTTCATGAGCGGAATCCTGAACAATATCGGTGATGTTTCAAAAATGACACCAGCTACTTTCATCAACAACGTTAATAAGTATTCAGTGGCGTTGTCATACTTGGCAACTGCATCGTTTTTTGCTTCCTTCCTCGAGGGCTATTGTTGGACAAGAACAAGTGAAAGACAAGCTGCAAGAATGAGAGTTAAGTATTTAAAAGCAGTGCTGAGACAAGATGTAGCATACTTTGATTTGCATGTCATAAGCACATCCGAGGCTCCAAATTTTTTTATGAACATGTTTAGGTTCCTTGGAAGCTATGCAGTGGCTTTTGCTTTGTTCTGGAGATTGGCCATTGTGGGGTTCCCCTTTGTGGTGCTACTTGTGATCCCTGGTTTAATTTATGGGAAGATTATGATGAGGTTGGCAAGAAAGATAAGAGGAGAGAGTAATAAGGCAGGTACTATAGCAGAACAAGCAATATCTTCCATCAGAACCGTTTATTCCTTTGTGGGGGAAAGCAAAACCATAGATGCTTTCTCTGATGCTCTACAAGGGTCTGTTAAATTGGGGCTGAGACAAGGCTTCGCTAAAGGTTTAGCCATTGGAAGCAACGGTGTTGTATTTGCTATATGGGCTTTCATGTGCTATTATGGAAGCAGATTGGTCATGTACCATGGTGCTAAAGGAGGGACAATATTTGCAGTTGGAACAGTCACGTGTATTGGTGGATCGGCATTAGGTGCTGGTTTATCTGATTTGAAGTACTTCACAGAAGCATGTGCTGCGGGGGAACGCATAATGGAAATGATAAAAAGAGTTCCCAAAATTGATTCTGATAATATGGCTGGGGAGATTCTGGAGAAGGTCTCAGGGGAGGTTGAATTTGATCATGTTAAATTTGTGTATCCATCAAGGCCAGACAGTGTTATTTTGACTGATTTTTGCCTAAAGATTCCAGCAGGGAAAACAGTGGCATTGGTTGGAGGAAGTGGCTCAGGAAAATCCACAGTTATTTCACTTTTGCAAAGATTTTATGACCCAATTGAGGGAGAGATACTTCTTGATGGTGTGGCTATTAATAGGTTACAATTAAAGTGGTTGAGGTCTCAAATGGGTTTGGTGAGCCAAGAGCCTACTCTGTTTGCAATCAGCATCAAGGAGAATATACTTTTTGGAAGAGAGAATGCAACTGAGGAAGAGGTTGTTGAGGCTTCAAAAGCTGCCAATGCTCATGATTTCATTTCACAGTTGCCACAAGGATATAATACTCAGGTTGGAGAAAAAGGAGTTCAAATGTCTGGTGGACAAAAGCAAAGGATTGCTATTGCACGAGCAATAATAAAAGGACCTCAAATCCTTCTTTTGGATGAAGCAACAAGTGCACTAGACTCTGAATCTGAACACAAAGTGCAAGAAGCTCTTGATAAAGTTGCTGCGGATAGAACCACCATTATCATAACTCATCGCTTATCCACCATAAGAGATGTATATGTCATTAATGTTTTGGAGAATGGGAAGATAATAGAGACGGGTTCTCATGACAAGCTCGTACAAAATGACAATGGATTTTACACATCTTTAGTTCATTTCCAACAACTTGAGAAATCAAAAAGTGACTCACTCTTGGACCCTGCAACTTTAAATGGAGACAAGGAAAACACAAGGAATCATGTTGTGAACCATTCTATTTCTGCAAACTCAGTGGCTCAATCAACTGTTGGTAATGGAGATAATGGTGAAAAAGTCAAAGATGATAAAAAGTCACCACCTCCATCATTTTGGAAATTGTTAGCCTTGAATCTCCCTGAATGGAAGCAAGCATGTTTGGGATGTTTGAATGCAATGTTATTTGGTGCAATTGAGCCAGTATATGCATTTGCAATGGGGTCCATTGTATCAATTTTCTTCCTCATTGATCATAATGAGATGAAAAGGAAAATTGTCATCTGTTGTTTATTTTTCATGGGATTGAGCGTGTTTTCATTGGTTGTTAATATTATACAACATTATAGTTTTGCTTACATGGGAGAATACTTGACCAAAAGGGTGAAAGAGAGAATGCTTTCCAAGATACTCAATTTTGAAGTTGCGTGGTTCGATCAGGACAAAAATTCCACTGGTGTTGTTTGCTCTAGACTAACTAAAGAATCCAACATAATCAGGTCTCTAGTGGGAGATAGAATGTCATTGTTGATACAAACTATCTCTGCCGTGGTGATAGCATGCACAATAGGCCTAATCATTGCTTGGAGATATGCCATTATATTGATAGTTATTCAACCTATTGGCACTGCAAGTTTCTACACAAGACGTGTACTCCTCAAGGGTATGTCTAAAAAGGCCATCAAAGCCCAAGATGAAACTAGCAAAATTGCAGTGGAAGCTATTTCTAACCTTCGAACCATCACTGCATTTTCCTCACAAGACCAGATCTTAAAAATGCTGAAAAAGGCTCAAGAAGGCCCAAGCCATGAAATCATTCGACAATCATGGTTTGCAGGCATTGGACTTGCGTGTGCTCGATCCCTTATGACCTTCTCTCGCGCTTTAGAATTTTGGTATGGTGGAAAGCTTGTTTTTTATGGCTATATCACTTCAAAACAACTCTTTCAAACATGTTTAATAATGGCAAATACAGGTAGGGTCATAGCAGATGCTAGTAGCCACACAAGTGACCTTGCGAAAGGAGCAGATGCCATTGACCTAGTTTTCTCTATCTTAGATAGAAACACAAAAATAAATTCTGATGAAACAAATGCATACAAGCCCCAAAAGTTAACAGGCCATATAGAATTCCAAGATGTCTACTTTGCATACCCATCAAGACCCAATGTGATGATCTTCCAAGACTTCTCAATTAAAATTGATGCAGGTAAATCCTCAGCATTGGTAGGGCAAAGTGGGTCTGGAAAATCAACTATAATAAGTTTAATAGAGAGATTTTATGACCCACTTAAAGGGATAGTAATGGTAGATGGTAGAGACATAAGGTCATATCATCTTAGGTCACTAAGGAACTACATTGCACTTGTGAGCCAAGAGCCAACTCTTTTTAATGGAACCATAAGGGACAACATTGCATATGGAGCATTTGATAAGACAAATGAAGTTGAGATAATTGAAGCAGCAAGGGTAGCTAATGCTCATGACTTTATTGCAAGCATGAAGGATGGTTATGACACACAATGTGGAGATAGAGGGGTACGGTTATCTGGGGGTCAGAAGCAGCGAATTGCAATAGCTAGGGCTGTGTTAAAGAACCCAAAAGTGTTGCTTTTGGATGAGGCTACTAGTGCACTTGATAGTCATTCAGAGAAGGTGGTTCAAAATGCTTTAGAGAAAGTGATGGTAGGGAGGACAAGTGTGGTGGTGGCTCATCGATTGAGCACCATAAGAAATTCTGATCAAATTGTTGTGTTGGATAAAGGAAAGGTGGTAGAGGAAGGGACCCATGCTTTTTTGATGGCTAAGGGACCAAGTGGAATTTACTGCTCTTTGGTGAGTCTTCAAAGAAGTGAAGTGGCATAGTGCTTCTTAAACTGAATCCTCCATCAACTAACTCAATCAAGTCAAGTCAAACACGTTAATGAATAGTCAATTTAAGATTTTTATCAACCTTAATATTTTGCTTTAGTGCGAATAGAATTATAAGATGGATACAAAGATAGTCTTAATACATAACTTGCTTTTATATTGTAAGCTATATGC 3849 0.3962 MGVEQNHTSVDTKNKTGSVRSIFMHADWLDWFFMVLGFFGAMGDGFTTPITLYFMSGILNNIGDVSKMTPATFINNVNKYSVALSYLATASFFASFLEGYCWTRTSERQAARMRVKYLKAVLRQDVAYFDLHVISTSEAPNFFMNMFRFLGSYAVAFALFWRLAIVGFPFVVLLVIPGLIYGKIMMRLARKIRGESNKAGTIAEQAISSIRTVYSFVGESKTIDAFSDALQGSVKLGLRQGFAKGLAIGSNGVVFAIWAFMCYYGSRLVMYHGAKGGTIFAVGTVTCIGGSALGAGLSDLKYFTEACAAGERIMEMIKRVPKIDSDNMAGEILEKVSGEVEFDHVKFVYPSRPDSVILTDFCLKIPAGKTVALVGGSGSGKSTVISLLQRFYDPIEGEILLDGVAINRLQLKWLRSQMGLVSQEPTLFAISIKENILFGRENATEEEVVEASKAANAHDFISQLPQGYNTQVGEKGVQMSGGQKQRIAIARAIIKGPQILLLDEATSALDSESEHKVQEALDKVAADRTTIIITHRLSTIRDVYVINVLENGKIIETGSHDKLVQNDNGFYTSLVHFQQLEKSKSDSLLDPATLNGDKENTRNHVVNHSISANSVAQSTVGNGDNGEKVKDDKKSPPPSFWKLLALNLPEWKQACLGCLNAMLFGAIEPVYAFAMGSIVSIFFLIDHNEMKRKIVICCLFFMGLSVFSLVVNIIQHYSFAYMGEYLTKRVKERMLSKILNFEVAWFDQDKNSTGVVCSRLTKESNIIRSLVGDRMSLLIQTISAVVIACTIGLIIAWRYAIILIVIQPIGTASFYTRRVLLKGMSKKAIKAQDETSKIAVEAISNLRTITAFSSQDQILKMLKKAQEGPSHEIIRQSWFAGIGLACARSLMTFSRALEFWYGGKLVFYGYITSKQLFQTCLIMANTGRVIADASSHTSDLAKGADAIDLVFSILDRNTKINSDETNAYKPQKLTGHIEFQDVYFAYPSRPNVMIFQDFSIKIDAGKSSALVGQSGSGKSTIISLIERFYDPLKGIVMVDGRDIRSYHLRSLRNYIALVSQEPTLFNGTIRDNIAYGAFDKTNEVEIIEAARVANAHDFIASMKDGYDTQCGDRGVRLSGGQKQRIAIARAVLKNPKVLLLDEATSALDSHSEKVVQNALEKVMVGRTSVVVAHRLSTIRNSDQIVVLDKGKVVEEGTHAFLMAKGPSGIYCSLVSLQRSEVA 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00484 1222 Gene3D ABC transporter type 1, transmembrane domain 624 965 IPR036640 GO:0005524|GO:0016020
Pste9g00484 1222 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 340 576 IPR003439 GO:0005524
Pste9g00484 1222 MobiDBLite consensus disorder prediction 616 635 - -
Pste9g00484 1222 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 661 942 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00484 1222 PANTHER ABC TRANSPORTER B FAMILY 11 702 IPR039421 -
Pste9g00484 1222 SUPERFAMILY ABC transporter transmembrane region 637 955 IPR036640 GO:0005524|GO:0016020
Pste9g00484 1222 CDD ABC_6TM_Pgp_ABCB1_D1_like 34 313 - -
Pste9g00484 1222 Pfam ABC transporter 360 507 IPR003439 GO:0005524
Pste9g00484 1222 Gene3D - 967 1221 IPR027417 -
Pste9g00484 1222 Gene3D ABC transporter type 1, transmembrane domain 22 599 IPR036640 GO:0005524|GO:0016020
Pste9g00484 1222 CDD ABC_MTABC3_MDL1_MDL2 977 1217 - -
Pste9g00484 1222 SUPERFAMILY ABC transporter transmembrane region 28 321 IPR036640 GO:0005524|GO:0016020
Pste9g00484 1222 CDD ABC_MTABC3_MDL1_MDL2 340 578 - -
Pste9g00484 1222 Pfam ABC transporter transmembrane region 656 922 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00484 1222 Pfam ABC transporter transmembrane region 34 281 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00484 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 578 IPR027417 -
Pste9g00484 1222 CDD ABC_6TM_Pgp_ABCB1_D2_like 644 960 - -
Pste9g00484 1222 ProSitePatterns ABC transporters family signature. 1117 1131 IPR017871 GO:0005524|GO:0016887
Pste9g00484 1222 ProSitePatterns ABC transporters family signature. 479 493 IPR017871 GO:0005524|GO:0016887
Pste9g00484 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 966 1217 IPR027417 -
Pste9g00484 1222 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 35 282 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00484 1222 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 977 1214 IPR003439 GO:0005524
Pste9g00484 1222 FunFam ABC transporter B family member 4 967 1221 - -
Pste9g00484 1222 SMART AAA_5 367 559 IPR003593 GO:0016887
Pste9g00484 1222 SMART AAA_5 1004 1191 IPR003593 GO:0016887
Pste9g00484 1222 Pfam ABC transporter 996 1145 IPR003439 GO:0005524
Pste9g00484 1222 Gene3D - 330 579 IPR027417 -
Pste9g00484 1222 FunFam ABC transporter B family member 4 330 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00484 Pste-Chr9 2435798 2442266 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00484 656 1219 Calmodulin-binding Proteins AT2G36910 35.336 2.01e-103 354