Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00482 GCCTAATTGAAATCCCTTCCTCTTACCCATTTCTCTAAACACTCTTTTGTTTTTCTTCTTGGATGGGTTATAGTGTTAGCATAACTCATTCCTAGTCTCTTTCTTTCCCTTCCCTGAAACCCTTTATATTAAAGGGTGTCTTGGGGCATCACTTTGGACCATTAAGTTGGGAGCTGAGGGTCAAAACCAGTTCATTGTTCAGAGGAAGATAGACATACACTTCTTCATCAAGAGCTAGGGTTTTTGTCCCCTCTCAAATTCATTAATTGAAAAGAGAAAAAAGAAAAAAAATTCAAATGTTCCCTTACAGTTCCAACCCCTACTCTTCCTTCCCTTCATCATCTTCTTCTTCATACTCTCCTTTTCCTTTTCTCAACCTTGAGAATGCTTCTGCAGGCAACACTCTTCTTCATGACCCTCTTTCTGTTCCTTACATACCAACTCATAACAACCCTTCAAGCATCCAAGAAGCACTGAACAATTTGCCAGTCACCGATCATAACTGTGGTGGTGGTGGTTCTGCAATGACCAAACCTGACCCTAGTGGTGGTGGTGGTGGTGGTGTTTCTCACTATGGCATTTCTTGTTTCCTTGCAAAGAAACCAGCTAAGAAAGACAGGCACAGCAAGATTTACACCTCTCAGGGTTTGAGGGACAGAAGGGTGAGGTTGTCCATTGAGATTGCTCGCAAGTTCTTTGATCTTCAAGACATGCTAGGGTTTGACAAAGCCAGCAACACCCTAGAGTGGCTCTTCAACAAGTCCAAGAGAGCAATTAAGGAGCTTGCAAGGAGCAAGAACAGCAACAACAGTGAGGAAGGAGTCAAAAGCTTCTCTTCTTCATCTGAGTGTGATGATGACTGTGAAGTGGCCTCTGAGGTTAAGCAGAAACAACAACTCATGACTTGTGATGCTGCTACTTCACACAACCTACAACAAGGGTTAGATTCAAGTGATAACAAGTCACCATCATTGATGGCTGCAAGGGAGAGGATGAAGTTGAAAAGGACACAGAAGGAACCTGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGGACTAGTAACAAGATCATGTGCAATGTTAACACCAACACAGGGAGGGTGCAACAAGACTTGAAGAAAAAATGCCCTGCAATTGAAAATAACAACTCTCAAATCATGCATCAATCAAGGTCACCTACTCACCCTCACCACCTTGTGGGAAGTGAAGCTCCTAGAGATGACTTCAACGTTATTGAGGAGTCCATTGTGATCAAGAGAAAGTTGAAGCCCTCGTTGATGTCCTCTTCTCATCATCATCACCAAAACCTTTTGATCCCTAAGGAACCACCAAGTTTCAACAACAACAGCAATAACAACAACAGTGAGTACCACCCCTTCTCCAATTTGTCTCCAAATTGGGATGCTAATGGATCCACTGGCCGCTCCAGCTTTTGTGCCATAGCTAGCATGAATCTATCCACAGTTCAACAACCCTTCAATTTTCAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGCACCAATCCACGTTTACACTAGAGTGTGTGTTGATTTTGGTTTGCCAAGGAATCATATGAAGGCATCTTTCTGTAACTTTTCTGTCCTATATTCCCTTTCTACAATGTTTGTACCTCATCTTCTTTTGCTCATCATCAGCCAATGGCGTGTGACAGTTGGCACAAAGGTTTCTGCTGCAAGTATTGGTTTCTGA 1733 0.4299 MFPYSSNPYSSFPSSSSSSYSPFPFLNLENASAGNTLLHDPLSVPYIPTHNNPSSIQEALNNLPVTDHNCGGGGSAMTKPDPSGGGGGGVSHYGISCFLAKKPAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKNSNNSEEGVKSFSSSSECDDDCEVASEVKQKQQLMTCDAATSHNLQQGLDSSDNKSPSLMAARERMKLKRTQKEPAKMKESREKARARARERTSNKIMCNVNTNTGRVQQDLKKKCPAIENNNSQIMHQSRSPTHPHHLVGSEAPRDDFNVIEESIVIKRKLKPSLMSSSHHHHQNLLIPKEPPSFNNNSNNNNSEYHPFSNLSPNWDANGSTGRSSFCAIASMNLSTVQQPFNFQGFKSLESLGRSAPIHVYTRVCVDFGLPRNHMKASFCNFSVLYSLSTMFVPHLLLLIISQWRVTVGTKVSAASIGF 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00482 478 MobiDBLite consensus disorder prediction 165 185 - -
Pste9g00482 478 Pfam TCP family transcription factor 104 264 IPR017887 -
Pste9g00482 478 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 81 376 IPR005333 GO:0003700
Pste9g00482 478 MobiDBLite consensus disorder prediction 234 258 - -
Pste9g00482 478 ProSiteProfiles TCP domain profile. 105 163 IPR017887 -
Pste9g00482 478 ProSiteProfiles R domain profile. 246 263 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00482 Pste-Chr9 2422623 2424517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00482 101 377 TCP Transcription Factor Family AT1G67260 33.813 2.64e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste9g00482 TCP 5.7e-45 No_clan