Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00472 AAAAAATTAAGTTTCCGCTGGTCAGACATACACTCTCTCTCTTGGCATCTCCAAGGCATCCTTTTCAGTAAGTTGCGTCTATAAATTGCAAACCTTTAAGGGCCAGTCTACAGGCCAATCCTTTGCATTGTTTTTTTTTTTTTCCTTGTTGGAGTTTTAACTTTCATGGGTTTGGTTCTCTGAATAAAAAGATACTAACTTTAGTGGAGAGAGAGAGAGTGAGAGGTTTTTGTTGTTGTGGGGTGTGATTTTGGTTCTTATTATTGGGAGATGGGAAGGCTCCAACAAAGCTTTGTTGTGAAAGGGGGTGTCAGATTGCCTATTGGGTTCAGGTTTTGTCCCACTGATGAAGAGCTTCTCCTTCATTACCTTAAGAAGAAGCTTTTTTCTCAGCAGTTACCTGCTTCTGTTATTTCTGAGTTTGATGTGTTTCAGACTGAGCCATGGAGGCTTCCAGATGGCATCTCCAATTGGAAGAAAACAGCTAGGAAACACTGGTACTTTTTTAGCAAAGCAAATTATGGCATTGTGTGTGAAAACATAAACAAGAGGGTTGCTGGTTCTGGGTCATGGAAATCTGTGGGCAAAGAAAAACAAATCATGAGTTCTGAGAACAATCAAGTAATTGGGATGAAGAAAAAACTGGTTTTCTACAAAGGGTCCCATCAGTCCAGAACTCGGTGGGTCATGCACCAATTGCATCTCGTAACTTCCTACACTTGTCAGATGCCAGTGGCAGATGTTGCAGTGTATCGCATATTTCAGAAAAAGAAGATGAAGACAACAAGATCTCATGGCTGTAGTAGTATCAAGCATCAAAGACTAGATGATGTTAAAGCCACTTTCATAGACTTTACAATGGAATTTGATCATGAAGACATAGGGCCTCCCCCACCTTGTTCCCCATGTCTAAGTGAAAGTTGTAGTGAAATCTCCTCTAGCAAGTTAGATTAGGATTTAAGAGTAGAATAGTGTTTGCTTCATATTTTCTTCTATTGTATTAGATAGGAAAGAGAAGCCTCTAAAAAAGCACAAAGTATTCCTATCTTTACTACTACTTTGTAAGAAATGAGAATGGTATTTTAAGAGCTTTGATTGGCTTTAACAATCAGTTTAGTTTGAGTTTAATTAGTATGCCCTCTTAATATAAAGAGTTTTACATTAATATTTAATTATATTATTTTATTTATGGTAATTTTGTTTACTTAATCCATTAATATTTTAAAATGTATATAAATAAAGAGTTGTGATTTAAC 1256 0.3646 MGRLQQSFVVKGGVRLPIGFRFCPTDEELLLHYLKKKLFSQQLPASVISEFDVFQTEPWRLPDGISNWKKTARKHWYFFSKANYGIVCENINKRVAGSGSWKSVGKEKQIMSSENNQVIGMKKKLVFYKGSHQSRTRWVMHQLHLVTSYTCQMPVADVAVYRIFQKKKMKTTRSHGCSSIKHQRLDDVKATFIDFTMEFDHEDIGPPPPCSPCLSESCSEISSSKLD 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00472 227 Pfam No apical meristem (NAM) protein 17 145 IPR003441 GO:0003677|GO:0006355
Pste9g00472 227 SUPERFAMILY NAC domain 8 166 IPR036093 GO:0003677|GO:0006355
Pste9g00472 227 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Pste9g00472 227 Gene3D NAC domain 25 171 IPR036093 GO:0003677|GO:0006355
Pste9g00472 227 PANTHER NAC TRANSCRIPTION FACTOR 56 16 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00472 Pste-Chr9 2362255 2365828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00472 9 168 NAC Transcription Factor Family AT5G13180 46.951 1.39e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste9g00472 NAM 9.7e-30 No_clan