Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00469 TGAAGAAGAAGCCACATACACCATAGTGGTCAGAGAATCTTACTGTTGGTTGTTTCTGAGGAAATTCATTAAAGGGTGGCACTAATGGGTGGTGATCATAACAGTACTTCTGTTTCGATGGCTACGAAGACCAAGAAGAGTGGCTCTTTTCGGTCCATTTTCATGCATGCTGATGGCCTAGATTGGTTTCTCATGATTTTTGGTCTCATTGGGGCCATTGGTGATGGCTTAGGCACCCCTTTGGTGTTGTTCATCACCAGCAAAATTATGAACAATATTGGAGATTTTTCTAGCAATATAGGCACCACTTTCATCCATAACATCAATCAGAATGCTGTAGTATTGTTATATTTGGCTGGTGGGTCTTTTGTTGCTTGTTTCCTTGGTAAGTGCCAGTTTTGCCATGATTTTCATTTGACTTTGACTGACTTATCTTACTTTCGTATTAACATTGCACTGCTTTTGCTTTGGGGGGTTTCAGAGGGTTATTGTTGGACAAGAACAGGAGAAAGACAGGCTGCAAGAATGAGAGTCAGGTACCTAAAAGCAGTGTTGAGGCAAGAAGTAGCATACTTTGATCTGCATGTAACAAGCACTTCTGAGGTCATTACCAGCGTCTCTAACGACAGCCTCGTAATTCAAGATGTTCTTGGTGAAAAGGTACCAAATTTTGTGATGAATGCCTCTATGTTTGTTGGGAGCTACATAGTGGCTTTTGCAGTATTGTGGAGATTGGCCCTTGTGGGGTTCCCTTTTGTGGCTCTACTTGTGATCCCTGGTTTTATGTATGGGAGGACATTAATGGGGTTGGCTAGCAAGATAAGAGAAGAGTTCAATAAGGCTGGTACAATAGCAGAACAGGCAATATCTTCCATCAGAACCGTTTATTCCTTTGTGGGGGAAAGTAAGACCATAGATGCTTTCTCTGAGGCTTTACAAGGCTCTGTTGAGTTGGGACTGAGACAAGGCTTAGCAAAAGGCTTAGCTATTGGAAGCAATGGTGTTGTCTTTGCTATTTGGGCTTTCATCTCATATTATGGTAGCAGATTGGTCATGTACCATGGTGCTCAAGGTGGGACTGTCTTTGCAGTTGGAGCAGCCATAGCACTTGGAGGATTAGCATTGGGTGCTGGTTTGTCCAATGTGAGGTACTTCTCAGAGGCAAGTACTGCGGGAGAACGCATAATGGAAATTGATTCGGACAACATGAGTGGGGAGATTCTAGAGAACGTTTCAGGAGAAGTTGAATTTGAGCATGTGAACTTTGTGTACCCATCAAGGCCAGAGAGTATTATTCTGAATGATTTTTGCCTAAGGATTCCAGCAGGGAAAACAGTAGCATTGGTTGGAGGGAGTGGCTCAGGAAAATCAACAGTGATATCACTTTTGCAGAGATTTTATGACCCAATAGAGGGAGAGATACGTCTTGATGGTGTGAGCATTAACAAGTTGCAACTAAAGTGGTTGAGGTCTCAGATGGGTCTGGTGAGCCAAGAGCCTGCACTGTTTGCAACCAGCATTAAGGAGAATATACTTTTTGGAAGAGAGGATGCCACTGAGGAAGAGGTTGTGGAGGCTGCAAAAGCTTCCAATTCTCATCACTTTATCTCACAGTTGCCACAAGGATACCATACTCAGGTTGGGGAGAGGGGAGTTCAAATGTCAGGGGGTCAAAAGCAAAGAATTGCTATAGCACGAGCAATAATAAAAAAGCCACGAATTCTTTTGTTAGATGAAGCTACAAGTGCACTAGATTCTGAGTCAGAACGAGTTGTGCAAGAAGCTCTAGATAAAGCAGCAGTAGGACGCACTACCATAATCATTGCTCATAGATTGTCCACAATAAGAAATGCAGATATAATTGCGGTGGTCCAAAGTGGAAAAATCATGGAGATGGGGTCACACCATGAACTAATCCAAAATGAAAATGGTCTTTACACTTCACTAGTTCGTCTCCAACAAGCAAGCAATGAAAAGGAAGAGACCCAATTTCACCCTCCTCCTCCTTCATCTATATCAAACAAAGACATTCAAAACACAGATAGTCGTAGGCTCTCCATTGTAAGTCAATCTAGCTCTGTCAATTCAATGCCTCGTGTTGTTTGTGAGGATAATGTTATTGAAGAGGTTGTGGAAGATAAGAAGTTGTCACTTCCCTCATTTAGAAGGTTACTAGCAATGAACCTTCCAGAGTGGAAGCAAGCATGTTTAGGGTGTTTGAATGCTGTGTTGTTTGGTGCAATTCAACCTGTGTATGCATTTGCAATGGGATCGGTGATATCTGTGTACTTTCTCCAGGACCATGATGAGATAAAAAAGAAAACTATGATCTATTCACTTTGTTTCCTAGGATTGGCTGTGTTCTCCTTGGTGGTTAATATCCTCCAACATTATAACTTTGCTTATATGGGAGAGTACTTAACTAAAAGGGTTAGGGAACGAATGCTTTCTAAGATACTTACCTTTGAAGTTGGATGGTTTGATCAAGATGAAAATTCCACTGGTGCTGTTTGTTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGGTCTTTAGTGGGAGACAGAATGGCTTTAGTGGTGCAAACCATTTCTGCTGTAGTAATTGCTTTTACTATGGGTCTAATCATTGCATGGAGGTTGGCCATTGTTATGATAGCAGTTCAACCTATTATTATTGCTTGTTTCTACACAAGACGTGTCCTTCTTAAGAGCATGTCTAGTAAGGCCATTGAAGCCCAAGATGAAAGTAGCAAGATAGCTGCTGAAGCTGTTTCCAACCTTAGAACCATCACAGCTTTCTCTTCCCAAGATAGAATTCTTAAAATGCTTGAAAAGGCCCAAGAAGGCCCATGTCGTGAAAGCATTAGACAATCATGGTTCGCAGGTATTGGTCTTGCATGTTCCCAAAGCCTGACATTTTGCACTTGGGCTTTAGACTTTTGGTATGGTGGCAAGCTTGTGTTTCATGGTTATATCAATGCAAAAGCACTATTTGAGACCTTCATGATCTTAGTGAGTACAGGTAGGGTCATTGCAGATGCTGGTAGCATGACTAATGATCTTGCTAAAGGGGCTGATGCTGTGGGCTCAGTTTTTGCAATCTTAGATGGGTACACAAAAATTGAGCCAGATGACATAGATGGGAACAAGCCTGAAAAAATAACAGGGAAAATAGAGCTTCTTGATGTGCATTTTGCATACCCAGCAAGACCTAATGTAATGATCTTTGAAGGCTTCTCAATCAAAATAGATGCAGGGAAATCAACAGCATTGGTAGGACAAAGTGGGTCTGGAAAATCAACAATAATAGGATTAATAGAGAGATTCTATGACCCATTAAAAGGGATTTTAACAATTGATGGTAGAGACATAAAATCATATCATCTTAGGTCATTAAGGAAGCACATTGCTCTTGTGAGCCAAGAGCCAACGTTGTTTGGTGGGACCATAAGGGAAAATATTGCATATGGAGCATCTAACAAGGTTGATGAAACTGAGATCATAGAAGCAGCAAGGGCAGCTAATGCTCATGATTTCATTGCAAGCCTAAAGGATGGTTATGACACATGGTGTGGAGATAGAGGAGTGCAACTCTCTGGGGGTCAAAAGCAAAGAATTGCAATAGCTAGAGCCATATTGAAGAACCCAGAAGTGTTGTTGTTGGATGAAGCAACCAGTGCCCTTGATAGTCAATCAGAGAAATTGGTGCAAGATGCCTTAGAAAGGGTGATGGTAGGGAGAACTAGTGTGGTGGTGGCTCATAGGTTAAGCACCATACAAAACTGTGATCTAATTGCTGTGTTAGATAAGGGAAAAGTGGTGGAGAAAGGAACTCATTCATCTTTGTTGACTGAGGGACCAAGTGGAGCCTATTACTCTTTAGTAAGTTTACAAAGAAGACCAACAAAACATGAATAT 3918 0.416 MGGDHNSTSVSMATKTKKSGSFRSIFMHADGLDWFLMIFGLIGAIGDGLGTPLVLFITSKIMNNIGDFSSNIGTTFIHNINQNAVVLLYLAGGSFVACFLGKCQFCHDFHLTLTDLSYFRINIALLLLWGVSEGYCWTRTGERQAARMRVRYLKAVLRQEVAYFDLHVTSTSEVITSVSNDSLVIQDVLGEKVPNFVMNASMFVGSYIVAFAVLWRLALVGFPFVALLVIPGFMYGRTLMGLASKIREEFNKAGTIAEQAISSIRTVYSFVGESKTIDAFSEALQGSVELGLRQGLAKGLAIGSNGVVFAIWAFISYYGSRLVMYHGAQGGTVFAVGAAIALGGLALGAGLSNVRYFSEASTAGERIMEIDSDNMSGEILENVSGEVEFEHVNFVYPSRPESIILNDFCLRIPAGKTVALVGGSGSGKSTVISLLQRFYDPIEGEIRLDGVSINKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATEEEVVEAAKASNSHHFISQLPQGYHTQVGERGVQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIRNADIIAVVQSGKIMEMGSHHELIQNENGLYTSLVRLQQASNEKEETQFHPPPPSSISNKDIQNTDSRRLSIVSQSSSVNSMPRVVCEDNVIEEVVEDKKLSLPSFRRLLAMNLPEWKQACLGCLNAVLFGAIQPVYAFAMGSVISVYFLQDHDEIKKKTMIYSLCFLGLAVFSLVVNILQHYNFAYMGEYLTKRVRERMLSKILTFEVGWFDQDENSTGAVCSRLAKEANVVRSLVGDRMALVVQTISAVVIAFTMGLIIAWRLAIVMIAVQPIIIACFYTRRVLLKSMSSKAIEAQDESSKIAAEAVSNLRTITAFSSQDRILKMLEKAQEGPCRESIRQSWFAGIGLACSQSLTFCTWALDFWYGGKLVFHGYINAKALFETFMILVSTGRVIADAGSMTNDLAKGADAVGSVFAILDGYTKIEPDDIDGNKPEKITGKIELLDVHFAYPARPNVMIFEGFSIKIDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGILTIDGRDIKSYHLRSLRKHIALVSQEPTLFGGTIRENIAYGASNKVDETEIIEAARAANAHDFIASLKDGYDTWCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLTEGPSGAYYSLVSLQRRPTKHEY 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00469 1278 MobiDBLite consensus disorder prediction 628 649 - -
Pste9g00469 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 714 995 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00469 1278 Pfam ABC transporter 1050 1198 IPR003439 GO:0005524
Pste9g00469 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1030 1267 IPR003439 GO:0005524
Pste9g00469 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 387 623 IPR003439 GO:0005524
Pste9g00469 1278 SUPERFAMILY ABC transporter transmembrane region 691 1014 IPR036640 GO:0005524|GO:0016020
Pste9g00469 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 359 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00469 1278 SMART AAA_5 1057 1250 IPR003593 GO:0016887
Pste9g00469 1278 SMART AAA_5 414 703 IPR003593 GO:0016887
Pste9g00469 1278 PANTHER ABC TRANSPORTER B FAMILY 13 720 IPR039421 -
Pste9g00469 1278 Gene3D - 1020 1277 IPR027417 -
Pste9g00469 1278 FunFam ABC transporter B family member 4 1020 1276 - -
Pste9g00469 1278 FunFam ABC transporter B family member 4 377 633 - -
Pste9g00469 1278 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524|GO:0016887
Pste9g00469 1278 Gene3D ABC transporter type 1, transmembrane domain 673 1018 IPR036640 GO:0005524|GO:0016020
Pste9g00469 1278 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 367 - -
Pste9g00469 1278 FunFam Putative ABC transporter B family member 8 673 1018 - -
Pste9g00469 1278 CDD ABC_MTABC3_MDL1_MDL2 1030 1270 - -
Pste9g00469 1278 Gene3D ABC transporter type 1, transmembrane domain 25 633 IPR036640 GO:0005524|GO:0016020
Pste9g00469 1278 Pfam ABC transporter 405 554 IPR003439 GO:0005524
Pste9g00469 1278 Gene3D - 377 626 IPR027417 -
Pste9g00469 1278 CDD ABC_MTABC3_MDL1_MDL2 387 625 - -
Pste9g00469 1278 ProSitePatterns ABC transporters family signature. 1170 1184 IPR017871 GO:0005524|GO:0016887
Pste9g00469 1278 Pfam ABC transporter transmembrane region 127 336 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00469 1278 Pfam ABC transporter transmembrane region 709 977 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste9g00469 1278 CDD ABC_6TM_Pgp_ABCB1_D2_like 697 1013 - -
Pste9g00469 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1024 1270 IPR027417 -
Pste9g00469 1278 SUPERFAMILY ABC transporter transmembrane region 33 370 IPR036640 GO:0005524|GO:0016020
Pste9g00469 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 625 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00469 Pste-Chr9 2344208 2352039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00469 21 1271 Calmodulin-binding Proteins AT2G36910 44.019 0.0 1050