Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00462 TGTGTTTGCGTTCTGTGTACGAAGCTATGGACAAAACCAAGCCCTGGTGGTGGAGGAGGAGGGGAGGAGGCGGAGGCGGGGGGAGGTGGCAATGGAGGTGGTGTTGGTGGGGAGCAACTACTTCCCAGAAACTGACTACCAATGATGCGTTGTCCTATTTGAAGGAAGTCAAAGACATGTTTCAGGACCAAAGAGAGAAATACGACATGTTCCTTGAGGTCATGAAAGATTTCAAGGCTCAAAGGACTGACACTGCTGGTGTCATAAAAAGGGTGAAGGAATTATTCAAAGGGCACAATAATTTGATTTTTGGATTTAATACTTTCTTGCCAAAGGGTTATGAGATAACACTTGACGAGGATGAGGCTCCTCCAAAGAAAACGGTTGAATTTGAAGAAGCAATCAGTTTTGTCAACAAGATAAAGAAACGATTCCAAAGTGATGAGCATGTTTACAAATCATTCTTGGAGATTTTAAATATGTACCGCAAAGAGCATAAGGACATTGGTGAGGTTTATAGTGAGGTTGCTACCCTCTTTAAGGACCATCGTGATTTGCTTGAGGAGTTCACTAGATTCTTACCAGATAATTCTGCTGCACCTTCTACTCAGCATGCTCCATTCAGTCGAAATTCATTGCAGCGCTTTAATGAGCGGAGTTCTATGGCCCCAATGATTCGCCAAATGCCAGCAGATAAGGCACAACGTTATCGACGAGACAGGCTTCCTTCTCATGATCGTGATATGAGTGCTGAACGCCCTGAGCTGGATGATGACAAAACAATGATGAACATACACAAGGAGCAGAGGAAGCGGGAAAGTAGGGATAGGAGGATGCGAGATCAGGATGAGAGAGAACATGATCTTGATAACAGCAGGGATTTGAACTTGCAACGCTTTCCTGACAAAAAGAAATCTGTCAAGAAGGCTGAAGGTTTTGGAATGGCTTCTGACTTTACTTCTTATGATGACAAAGATACCTTAAAGAGCATGTATAGTCAAGCATTCAGTTTCTGTGAGAAAGTTAAGGAGAAGTTGAGTAGTTCTGATGATTACCAAACATTCTTGAAGTGCCTTCATATTTTCAGCAATGGAATAATTAAAAGGAATGATTTGCAAAACTTGGTTACTGATTTACTTGGAAAGCATTCAGATCTTATGGATGAATTCAATGATTTCTTGGAACGTTGTGAAAATATTGATGGATTCCTTGCTGGTGTCATGAGTAAAAAGTCACTCTCTACTGATGCTCATTTATCAAGATCATCAAAGTTGGAGGACAAAGACAAAGAGCACAAGCGTGATACGGATGGAGCTAAAGAGAAGGAAAGATACAGGGAGAAATACATGGGAAAATCTATTCAAGAACTTGACCTTAGTGACTGTAAACGTTGTACTCCCAGTTACCGACTTCTGCCTGCAGATTACCCAATTCCTACAGCTAGTCAGAGATCTGAACTTGGTGCTCAAGTATTGAATGACCACTGGGTATCTGTGACTTCTGGAAGTGAGGATTACTCTTTCAAACATATGAGGAGAAATCAATATGAAGAAAGCTTGTTCAGATGCGAAGATGACAGATATGAGCTGGACATGTTATTAGAGTCTGTGAGTTCAGCTGCTAAACGAGCAGAGGAATTGTATAATAACATCAATGAAAATAAAATCAGTGTGGAGACTCTGAACCGTGTTGAAGATCACTTTACCGTTCTAAATTTAAGGTGCATTGAACGTCTATATGGTGATCATGGTCTGGATGTTATAGACATATTGCGTAAAAACCCAACACATGCCCTGCCTGTAATATTGACTCGACTGAAGCAGAAGCAAGAAGAGTGGAGTAGGTGTCGTTCAGATTTCAATAAAGTATGGGCTGAAATTTATGCTAAAAATCACTACAAATCACTTGATCATCCTTTGATTGCTGAGATTAAAGAAATTAAAGAAAAGCAGCAGAAAGAGGATGATATTATTCAGTCTATTGCAGCCGGAAATAAGCAACCGCTAATTCCACATCTGGAATTTGAATATTCTGATGTTGGGATTCATGAAGACCTGTATAAACTTGTTCGTTATTCATGTGAGGAGTTATTCTCAAGTAAAGAGCTGCTAAATAAAATTATGAGGCTTTGGAGTATCTTCTTGGAGCCAATGCTTGGTGTTCCTTCCCAATCTCAAGGAACAGAAAGGACTGAGGAAAGAAAAACTGGGCATAATGTTCAGAATTTTTGTGCACCTAGTATAGGGGGTGATGGAAGTCCTCGTGGAGACTCCGTTTCAATAAATTCAAGGGTACCAAAATCTGATAAGAATGATGCTGATGGTAGAGCAATTGAAGTGAAGAATGCTCACCGGACTAGTACGGCATCCAATGATAAAGAAAATGGATCTGTTGGTGGTGAACTTGTTTGTAGAGATGATTCATTAATGGATAAAGGACAGAAAAATGCAGAATGCAATGATAAAGCCTCTGGATTTAGCAAACAGTTTACCTCTGATGAACAAGGAGCTAAAAACAATGTGTCAATTGCAATTAGAGGAGAAAACAGTCTGAACAGAACTAACGGTGATGTGTCTCCAGGCCGTACCCTTACTCCATCACGACCTACTGATGTTGATGATTCTGTAGTCAAGTCTCAGGGTGTCAATGTACCTGCAGTGGAGGGATGTGACATGGCAACTCCCGTACCAGTGGCCAATGGTGTTCTAAGCGAGAGCAGTAAAGTTAAAACTCACGATGAATCTGCTGGGCCTTGCAAAATTGAAAAGGAAGAGGGTGAATTATCACCAAATGGTGACTCTGAGGAGGATAACTTTGTTGCCTATGGAGATTCAAATGTGCAGTCAATGGCCAAATCAAAGCACACCATTGAAAGAAGGAAATATCAATCTAGAAATGGAGAGGATGAATGTTGTCTTGAAGCTGGAGGTGACAATGATGCAGATGCTGATGATGAGGACAGTGAAAATGTTTCTGAAGCTGGTGAAGATGTCTCAGGCAGTGAATCTGCTGGTGAAGAATGCTTCCGGGAAGATCATGAAGAGGAGGAAGATATAGAACATGACGATGTTGATGGTAAGGCTGAGAGTGAAGGTGAAGCTGAGGGGATCTGTGATGCACAAGCTGGAGGAGACGGCACATCTTTGCCATTATCAGAGAGGTTCCTTTCATCTGTGAAACCTCTCACAAAGCATGTGTCAGCAGTTTCATTTGTTGAAGAAATGAAGGATTCAAGGGTGTTCTATGGAAATGATGATTTCTATGTACTTTTTAGACTTCATCAGACTCTTTATGAGAGGATCTTATCGGCCAAAACAAATTCGATGAGTGCAGAAATGAAATGGAAAGCAAAAGATGCTAATTCACCAGATCCTTATTCAAGATTTATGAATGCATTGTACAACTTGCTTGATGGATCTGCTGAAAATGCAAAGTTTGAAGATGAATGCCGAGCAATTATTGGGAACCAGTCATATGTGTTATTCACATTGGATAAGTTAATATACAAACTAGTTAGACAGCTGCAAACTGTTGCAACTGATGAGGTAGATAGTAAGCTTCTTCAATTATATGAATATGAAAAATCTCGGAAGCCTGGGAAGTTAAATGATTCTGTATATCATGCAAATGCTCATATCATACTTCATGAGGAGAACATATATCGTTCCTCTACCCCCTCACGGCTATCCATCCAGATCATGGACAATATGAATGAAAAGCCTGAGTTGTTTGCGATTTCTATTGATCCAAATTTCTCTTTTTATCTTCACAATGATTTTCTATCTGTCTTTCCCTGCAAAAAGGAGCCCCACGGCATCATACTGCATAGAAACATACGCAAATATGGAAACTTAGATGAGCTTTCTGCAATATGCTCTGCTATGGAAGGTGTTAAAGTAATTAACGGATTAGAATGTAAGATAGCGTGCAACTCATCCAAGATTTCATATGTTCTTGACACACAAGATTTTTTCTTCCGTCCAAAAAAGAAAAGACGAACACAGTCGGGGACCACATCGGCTCGGTTTCGTAGGGATAGAGAGGAAAGATACCGCAAATTGTTGGCATGTTCGTAAGTTGTATCTTCATGAAGAGTTGTTCTCTAACATCTGTTAAAACGGCTAAGAAGACTCTGATACATAATTGTATGTTTATAGGAGTCTTGAAGCAACCTAGGAAACCTTTGGTTAACAATTTTATTTGTTGTCATAGAACTTGAATTTTCACAGCAAAGTGGAGGAGGGAAATATAGATGGAAGTGAGTAATGTTTGAGGTCTCATGCGTTGCCACTCCTTTGTAAATAGTTTGCTTCATTATATATTTGTAGAATATTGTTTTACCAAATTGTTTATTAGTTGCAACACAGTTGCTTCCTCCAATCCCTGCTTGAAT 4393 0.3997 MDKTKPWWWRRRGGGGGGGRWQWRWCWWGATTSQKLTTNDALSYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIKRVKELFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLEILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDNSAAPSTQHAPFSRNSLQRFNERSSMAPMIRQMPADKAQRYRRDRLPSHDRDMSAERPELDDDKTMMNIHKEQRKRESRDRRMRDQDEREHDLDNSRDLNLQRFPDKKKSVKKAEGFGMASDFTSYDDKDTLKSMYSQAFSFCEKVKEKLSSSDDYQTFLKCLHIFSNGIIKRNDLQNLVTDLLGKHSDLMDEFNDFLERCENIDGFLAGVMSKKSLSTDAHLSRSSKLEDKDKEHKRDTDGAKEKERYREKYMGKSIQELDLSDCKRCTPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRYELDMLLESVSSAAKRAEELYNNINENKISVETLNRVEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNHYKSLDHPLIAEIKEIKEKQQKEDDIIQSIAAGNKQPLIPHLEFEYSDVGIHEDLYKLVRYSCEELFSSKELLNKIMRLWSIFLEPMLGVPSQSQGTERTEERKTGHNVQNFCAPSIGGDGSPRGDSVSINSRVPKSDKNDADGRAIEVKNAHRTSTASNDKENGSVGGELVCRDDSLMDKGQKNAECNDKASGFSKQFTSDEQGAKNNVSIAIRGENSLNRTNGDVSPGRTLTPSRPTDVDDSVVKSQGVNVPAVEGCDMATPVPVANGVLSESSKVKTHDESAGPCKIEKEEGELSPNGDSEEDNFVAYGDSNVQSMAKSKHTIERRKYQSRNGEDECCLEAGGDNDADADDEDSENVSEAGEDVSGSESAGEECFREDHEEEEDIEHDDVDGKAESEGEAEGICDAQAGGDGTSLPLSERFLSSVKPLTKHVSAVSFVEEMKDSRVFYGNDDFYVLFRLHQTLYERILSAKTNSMSAEMKWKAKDANSPDPYSRFMNALYNLLDGSAENAKFEDECRAIIGNQSYVLFTLDKLIYKLVRQLQTVATDEVDSKLLQLYEYEKSRKPGKLNDSVYHANAHIILHEENIYRSSTPSRLSIQIMDNMNEKPELFAISIDPNFSFYLHNDFLSVFPCKKEPHGIILHRNIRKYGNLDELSAICSAMEGVKVINGLECKIACNSSKISYVLDTQDFFFRPKKKRRTQSGTTSARFRRDREERYRKLLACS 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00462 1349 MobiDBLite consensus disorder prediction 223 289 - -
Pste9g00462 1349 MobiDBLite consensus disorder prediction 713 793 - -
Pste9g00462 1349 SMART hdac_interact2seq4b 452 552 IPR013194 -
Pste9g00462 1349 MobiDBLite consensus disorder prediction 964 984 - -
Pste9g00462 1349 FunFam Paired amphipathic helix protein Sin3 40 102 - -
Pste9g00462 1349 FunFam Paired amphipathic helix protein SIN3 316 390 - -
Pste9g00462 1349 Pfam Sin3 family co-repressor 454 546 IPR013194 -
Pste9g00462 1349 Gene3D Paired amphipathic helix 40 102 IPR036600 GO:0006355
Pste9g00462 1349 Pfam C-terminal domain of Sin3a protein 1072 1316 IPR031693 -
Pste9g00462 1349 SUPERFAMILY PAH2 domain 322 388 IPR036600 GO:0006355
Pste9g00462 1349 Gene3D Paired amphipathic helix 117 189 IPR036600 GO:0006355
Pste9g00462 1349 ProSiteProfiles PAH domain profile. 118 188 IPR003822 GO:0006355
Pste9g00462 1349 Gene3D Paired amphipathic helix 317 390 IPR036600 GO:0006355
Pste9g00462 1349 MobiDBLite consensus disorder prediction 806 866 - -
Pste9g00462 1349 SUPERFAMILY PAH2 domain 32 103 IPR036600 GO:0006355
Pste9g00462 1349 PANTHER SIN3B-RELATED 34 1204 IPR039774 GO:0003714
Pste9g00462 1349 MobiDBLite consensus disorder prediction 811 866 - -
Pste9g00462 1349 FunFam Paired amphipathic helix SIN3-like protein 117 188 - -
Pste9g00462 1349 MobiDBLite consensus disorder prediction 410 433 - -
Pste9g00462 1349 ProSiteProfiles PAH domain profile. 34 104 IPR003822 GO:0006355
Pste9g00462 1349 MobiDBLite consensus disorder prediction 1000 1015 - -
Pste9g00462 1349 SUPERFAMILY PAH2 domain 115 187 IPR036600 GO:0006355
Pste9g00462 1349 MobiDBLite consensus disorder prediction 898 919 - -
Pste9g00462 1349 Coils Coil 525 545 - -
Pste9g00462 1349 MobiDBLite consensus disorder prediction 758 772 - -
Pste9g00462 1349 Pfam Paired amphipathic helix repeat 57 101 IPR003822 GO:0006355
Pste9g00462 1349 Pfam Paired amphipathic helix repeat 141 185 IPR003822 GO:0006355
Pste9g00462 1349 Pfam Paired amphipathic helix repeat 341 385 IPR003822 GO:0006355
Pste9g00462 1349 ProSiteProfiles PAH domain profile. 319 388 IPR003822 GO:0006355
Pste9g00462 1349 MobiDBLite consensus disorder prediction 895 1024 - -
Pste9g00462 1349 MobiDBLite consensus disorder prediction 944 963 - -
Pste9g00462 1349 MobiDBLite consensus disorder prediction 411 433 - -
Pste9g00462 1349 MobiDBLite consensus disorder prediction 208 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00462 Pste-Chr9 2297587 2306294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00462 16 137 WRKY Transcription Factor Family AT4G12020 43.056 1.89e-21 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste9g00462 Sin3a_C 2.2e-51 No_clan