Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00454 GTTCTGTGCTATGCCCTTTCTCGTCTAAGAAAGCGATAACAGTCTCATCCAACACACAGAAAATTTTCACAAAACTGAAACTATGTTGTGGGTGGACAAGTACCGTCCCAAAACCCTAGACCACGTTATGGTCCACCCCGACATCGCTCACAATCTCAAGCAATTGGTAACGGAACAGGATTGCCCCCATTTACTCTTCTATGGGCCATCTGGGTCTGGCAAGAAAACCCTAGTCATGGCTCTTCTCCGCCAAATGTTCGGACCTGGTGCCGAAAAGGTGAAGGTGGAAAATAGGACGTGGAAAGTGGATGCTGGGAGTAGATCTATTGATATAGAGCTGACAACTCTATCAAGTGCAATTCACATTGAACTGAGTCCAAGTGATGCAGGATTTCAGGACAGATACGTTGTTCAGGAAGTAATCAAAGAAATGGCTAAGAATAGACCCATTGATACTAAGGGGAAGAAAGGATTTAAAGAAGCCCAACATTCTCTCCGGAGAACAATGGAAAAATACAGTTCTTATTGCAGATTAATTCTATGTTGCAATAGCTCTTCGAGAGTCACAGAAGCAATCCGCTCTCGATGTCTCAATGTGCGAATAAATGCACCAAGTGAAGAACAGATTGTTGAAGTTTTAGAATTCATTGGTAAGAAAGAAGGGCTGCAACTTCCTCCTGGTTTTGCTGCTCGTATTGCAGAGAAATCAAATCGGAATTTAAGGAGGGCCATATTGTCATTTGAGACATGTCGTGTCCAACAGTATCCTTTCACTAACAAACAAACAATTCCTCCAATGGACTGGGAAGAATATATATCTGAAATTGCAGCTGACATATTGAACGAACAGAGCCCCAAAAGGTTGTTTCAAGTTCGAGGGAAGCTCTATGAGCTTCTAATCAATTGCATTCCACCAGAGATCATTTTGAAGAGGCTTCTTCATGAGCTATTGAGAAAACTGGATGCAGAACTAAAGCATGAAGTATGTCATTGGGCTGCATATTATGAACATAGGATGCGTCTTGGACAGAAGGCCATTTTTCACATTGAAGCATTTGTTGCTAAGTTCATGAGCATTTATAAATCCTTCCTCATTGCAACATTCGGCTGAAGGGTGGAGATGATGGTTTGCTTTTCCATGATGCAACACATCAAATGACGGTTGATGCAACACCAGTTACATAACGTTCATCATGTATGCAAATATTGTGACAGAATTCTCATGCTTTAGTAAGTTAACAAAAATGTGGTTAAAACTAGTGAGCTTTTAAGTTCTAACAAACACGAAACTTCAAGTATGGAATTAGAAAAATGGTGTGAGGATACCTGAAATTTTGTTATTAGCTTGCGATAAATTATGTTTTACTTTCAGTCTGTTGGGGGAAAAGATCTTCATGCATAATTAATATAAT 1412 0.4008 MLWVDKYRPKTLDHVMVHPDIAHNLKQLVTEQDCPHLLFYGPSGSGKKTLVMALLRQMFGPGAEKVKVENRTWKVDAGSRSIDIELTTLSSAIHIELSPSDAGFQDRYVVQEVIKEMAKNRPIDTKGKKGFKEAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLEFIGKKEGLQLPPGFAARIAEKSNRNLRRAILSFETCRVQQYPFTNKQTIPPMDWEEYISEIAADILNEQSPKRLFQVRGKLYELLINCIPPEIILKRLLHELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00454 342 Gene3D - 1 177 IPR027417 -
Pste9g00454 342 FunFam Replication factor C subunit 3 240 333 - -
Pste9g00454 342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 228 IPR027417 -
Pste9g00454 342 Gene3D - 240 333 - -
Pste9g00454 342 FunFam Replication factor C subunit 5 1 177 - -
Pste9g00454 342 Gene3D - 178 237 - -
Pste9g00454 342 Pfam Rad17 P-loop domain 2 56 - -
Pste9g00454 342 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 3 329 - -
Pste9g00454 342 CDD HLD_clamp_RFC 177 245 - -
Pste9g00454 342 FunFam replication factor C subunit 3 178 236 - -
Pste9g00454 342 SUPERFAMILY post-AAA+ oligomerization domain-like 239 334 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00454 Pste-Chr9 2276511 2281955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00454 1 342 Core DNA Replication Machinery Family AT5G27740 80.791 0.0 615