Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00447 TGACTCTTAGTCCAAAACTCAAACCGTGGAAATTTGTGCAAAGTTAGAGTAACACAGAATAACCCAACACGCAAGTACAAACGTTGTTGGCCTTTGGTTGGATCCAACACTTTCACCTGACCAAACCTGAACTGTCTCTCAAATCCCATTGTTCTCAGCACTCACAACTCACAAGTTCGTTTTCTGAGTTTAAGGGTCTGCTTTGGCTATGGAGAACTCGGACAAGGTGGTGGCTGTGATCATGGTGGGTGGACCCACTAAAGGGACTAGATTTCGGCCTCTTTCCTTCAATACTCCCAAACCCCTTTTCCCTTTGGCTGGCCAGCCAATGGTTCACCATCCTATTTCTGCTTGTAAAAAGATACCCAATTTGGCTCAAATATTTCTTATTGGATTCTATGAGGAGCGAGAATTTGCTCTATACGTGTCTTCAATCTCAAATGAGCTGAAATTACCAGTAAGATATTTGAAGGAGGATAAACCGCATGGTTCAGCAGGTGGCATTTACTACTTCAGAGATATTATAATGGAAGACAGTCCATCACATATCTTTCTGTTAAACTGTGATGTCTGCTGCAGTTTTCCACTACCCTCAATGCTTGATGCTCATAGAAGATATGGTGGGATGGGGACAATGTTGGTAATCAAGGTTTCAGCTGAATCTGCTAGCCAGTTCGGTGAGTTGATTGCTGATCCAACCACTAATGAGTTGCTGCATTATACTGAGAAACCTGAGACATTTGTCAGCAATTTGATAAATTGTGGTGTCTACATTTTTACTCCTGATATTTTTACTGCCATCCATGATGTATATATTAATCAAGAAAGCAGAGCTAATCCACGTCGTGTATCCAGCTTTGAAACACTCCAATCTACCACGAGGAATATACCGGTAGATTTTGTAAGACTTGATCAAGATATATTGTCTCCTCTAGCTGGAAAGAAACAACTGTATACGTATGAGACAATGGATTTCTGGGAGCAAATTAAAACTCCGGGTATGTCATTGAAATGCTCAGAATTGTATCTTGCTCAATTCCGGTATACTTCACCTGATCTTTTAGCCAGTGGAGATGGTAAAAAGAAAGCTACAATTGTTGCAAACGTTCGTGTAGGTGCTGGTGTCAGGTTAAGCAGTTGTATCATCTTGGATGATGTTGAAATCAAGGAAAATGCTTTTGTGACAAACTCAATTGTTGGATGGAAGTCATCACTTGGAACATGGTCACATGTGCAGGCAAGAGAAGCTGTAACAGTTGAAGATGAAGTAGTAGTGTTCAACTGCATTGTTCTTCCCAATAAGACTCTTAATGTCAGTGTGCAAGAAGAAATCATCTTATAATCTGATGAAGTGAGTTTTACTGGGTACTCATCAAAAGAAGAGGCTTGGACCATTTTGGTTTTACCGTTTCTTTTATCAATTTCTTTGATCTAGGAATGATAAAGTTAAGTTTAGATACCACCTCATACAAGAAGTCTCCGCAATTTTTGGCTTAAATATGGAGTTATGTATATTTCAATATTATTTTTTCTCTTTCCAATTGTGTTTTATGTACACAAATGAACCTAAAAGTGTAAATCACACTTCAGACTAGATACTACTTCATACCAATGCTTTTCTAGTTCTAGGTGAATGCAAGGCCTACATTATTACTTCAATCGTTTACCTAAATTAGACTGG 1681 0.3896 MENSDKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPISACKKIPNLAQIFLIGFYEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGIYYFRDIIMEDSPSHIFLLNCDVCCSFPLPSMLDAHRRYGGMGTMLVIKVSAESASQFGELIADPTTNELLHYTEKPETFVSNLINCGVYIFTPDIFTAIHDVYINQESRANPRRVSSFETLQSTTRNIPVDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSELYLAQFRYTSPDLLASGDGKKKATIVANVRVGAGVRLSSCIILDDVEIKENAFVTNSIVGWKSSLGTWSHVQAREAVTVEDEVVVFNCIVLPNKTLNVSVQEEIIL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00447 377 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
Pste9g00447 377 Gene3D Hexapeptide repeat proteins 286 374 - -
Pste9g00447 377 FunFam Mannose-1-phosphate guanyltransferase alpha 6 277 - -
Pste9g00447 377 CDD M1P_guanylylT_A_like_N 9 273 - -
Pste9g00447 377 Pfam Nucleotidyl transferase 9 218 IPR005835 GO:0009058
Pste9g00447 377 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 332 IPR029044 -
Pste9g00447 377 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 8 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00447 Pste-Chr9 2250350 2256506 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00447 19 361 Eukaryotic Initiation Factors Gene Family AT2G34970 21.120 2.87e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g00447 9 2250350 2256506 Pste9g00447 9 2250350 2256506 ECH