Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00438 GTTTGACAATTTCCATTGTGTCTTTCCATGGTGAATGGCTGAACCCAGTGTTCCCCTGAAGCGTAGCACAACACAAGAGCCTCTTCTTCTTCAATGCGCAGAGTTGGTTTTACCATACCTAACCCCTTCAGAGATCGCCGCCGTCTCGTTAGCCTGCAAACGTCTCTCCACCGTCTCCCGCTCCGTCACCGCCCGCCGCGCCTCCGACGCTTCCCGAACCCTCGAGCCGCTTCCCGTTCCCTTCCTCAACGCCCTCGGCTCCCACCCCTACGCGCACTTCCTCTACACGCGCTCCCTCGTCTTAGCCCCTCCGCTTCTTCATCCCCGCCAGCCCTGGGGCAGTTCCGTCATTTTGTCCTCTGAGACAGCCTGGCCTCTCGCGGAGGACGTCGGGCTTGCATGTGGGCCGGGCCGGTCCCGGGTGGGCTGCGAGTGCCGGAGCTGTGTGGGGGGCTGTCCCTGTGATGATGGGGTGGAGGACGTGGGCCGGGAGTGTGGGCCCGGGTGTGGGTGTGGGCCCAAGTGCGGGAATAGGGTTGCCGGGAATGGGGTGAAGGTGAAAGTGAAGATTGTGAGAGATGAGAGGAAAGGATGGGGGTTGAAAGCGGATCAGTTCATTCGGAAAGGGGACTTTCTCTTTGAGTATGCAGGTGAACTCTTGACAACCAAGGAGGCACAAAGAAGACATCAAAATTATGATGAACTGTCTTCACAGGGTCGTTTCTCTTCTGCTCTTTTGGTAGTAAGGGAACATCTTCCTTCTGGAAAGGCATGTCTGAGATTGAACATCGACGCAACAAGAATAGGAAACGTTGCACGGTTTGTAAATCATTCATGTGACGGTGGTAATTTAAGCACAAAGCTAGTTAGAAGTTCAGGAGCTTTGTTCCCCCACCTCTGTTTTTTTGCTTCAAAAGATATCCAAGTAGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGAATAGGGCTAATGGGTTGCCATGCTTTTGCAATAGCCCTTGTTGCTTTGGAACATTGCCCTCTGAAGACACTTGAGAGTTGAGATAAAATGCTATTTAAGAATGTAACCTATGTTAATTGTCAAAGGAATATTGATTTAGGAAAGGGTGGTTTATTTTTTTATAAATTTGACAATAGGTCTTAACAGGCATTGCAAATATCCTTGTCACATGTGAGTGTTTAGTTAGCCACCAATATTTGTATGTAGTGTAATCTTGCATGATTACAATATGACATTCTTTTAAAAAATAGAGCAAATTTCAATCACCC 1273 0.4918 MAEPSVPLKRSTTQEPLLLQCAELVLPYLTPSEIAAVSLACKRLSTVSRSVTARRASDASRTLEPLPVPFLNALGSHPYAHFLYTRSLVLAPPLLHPRQPWGSSVILSSETAWPLAEDVGLACGPGRSRVGCECRSCVGGCPCDDGVEDVGRECGPGCGCGPKCGNRVAGNGVKVKVKIVRDERKGWGLKADQFIRKGDFLFEYAGELLTTKEAQRRHQNYDELSSQGRFSSALLVVREHLPSGKACLRLNIDATRIGNVARFVNHSCDGGNLSTKLVRSSGALFPHLCFFASKDIQVDEELTFSYGEIRNRANGLPCFCNSPCCFGTLPSEDT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00438 334 SMART set_7 175 313 IPR001214 GO:0005515
Pste9g00438 334 Gene3D SET domain 37 315 IPR046341 -
Pste9g00438 334 SUPERFAMILY SET domain 56 320 IPR046341 -
Pste9g00438 334 ProSiteProfiles SET domain profile. 175 307 IPR001214 GO:0005515
Pste9g00438 334 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 128 324 - -
Pste9g00438 334 Pfam SET domain 186 307 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00438 Pste-Chr9 2152338 2161402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00438 153 329 C2H2 Transcription Factor Family AT2G23740 36.957 1.31e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste9g00438 SET 4.7e-18 No_clan