Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00436 CAACCTTAAACGTTTATCTCTCTCAAACAACAAGCCCTCACCATTCTCACCTTGCCAACCCCATTCACAAGACCAACGTGCCTCTCCCAATCACCCCATATAAGCATCACCACCACCATCCCAACACCCCAACACAACACAACACATCACATCACTCCAATTAGTTACTAACCATGGCAGAGCCAGACGGCAGTCGTGGTAATGGTGGTGGTAGTAACAATAGCATGTCCGGAAGTAGACGCAAAACATCTACCTCCAGACACATCGTACAAACACAAGAGGAGGCAATGGGTAGTGGGGCCTCTCCCACCACCCCTTGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGGGGGGTGCATCTTTGCACCCCACTTTGGCACTGACCAAGGTGCAGCTAAGTTTGCAGCTGTTCACAAGGTGTTTGGGGCAAGCAATGTGTCTAAGCTCTTATCCAACATCCCGGCAAACCGTCGCCATGAGGCGGCGACCACCATATCTTATGAGGCTCAGGCAAGATTGTCTGATCCGGTTTATGGTTGTGTCTCTACCATCCTTGCTCTACAACAACAACAACCAACAATGAACAACAATGCAGCAGCAACACTTCAACCAACATACTCCAACAACTCTTGTGCTTCAACCAACCTCATGAACTTGAGCAGCTTCAACAACAACCCTAGCTTTGACCTTGCAATGGACACAGCAGCACTCTCTTCTCATAGGTTGGATCAGCCTCTTCAGCTCTCTAGGTTGTCTCAGTATGAAGAAGAGGATGAAGAAGAAAGCAGGACTCAGCACCAAGGGTTCAGCCACCATTAA 824 0.4903 MAEPDGSRGNGGGSNNSMSGSRRKTSTSRHIVQTQEEAMGSGASPTTPCGACKFLRRKCIGGCIFAPHFGTDQGAAKFAAVHKVFGASNVSKLLSNIPANRRHEAATTISYEAQARLSDPVYGCVSTILALQQQQPTMNNNAAATLQPTYSNNSCASTNLMNLSSFNNNPSFDLAMDTAALSSHRLDQPLQLSRLSQYEEEDEEESRTQHQGFSHH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00436 216 PANTHER LOB DOMAIN CONTAINING PROTEIN 46 191 - -
Pste9g00436 216 MobiDBLite consensus disorder prediction 196 216 - -
Pste9g00436 216 Pfam Lateral organ boundaries (LOB) domain 48 143 IPR004883 -
Pste9g00436 216 MobiDBLite consensus disorder prediction 9 42 - -
Pste9g00436 216 MobiDBLite consensus disorder prediction 1 44 - -
Pste9g00436 216 ProSiteProfiles LOB domain profile. 47 149 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00436 Pste-Chr9 2140192 2143991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00436 47 206 AS2 family AT3G03760 54.229 4.11e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste9g00436 LOB 6.1e-35 No_clan