Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00409 TCATTCTTCAATTTTTCCATCTTTCACCAAATTCACAACATCCCTATTCATGGCTTCAGGTGGAACAGAAGCTTTACCAGATTTGGGTAAACATTGCCAGCATCGCCATTGCAACCAGCTTGATTTTCTTCCTTTTACATGCGACGGTTGCAAACAGGTATTTTGTTTGGAGCATAGATCCTACAAGTCCCACGCGTGCCCGAAATCCGACCACAACAGCAGAAAGGTAGTTGTATGTGAAACATGTAACATGTCCATTGAGACCACTGGCCACTTGGAACAAGATGAGGAAGCAATTTTGCAGCAGCACCACAAGTCTGGTCACTGTGACCCCACCAAGAAGAAGAAACCTATTTGCCCCGTTAAGCGTTGCAAGGAGGTTTTGACGTTTTCCAACACCAGCACATGTAAAACTTGCCACATTAAGGTGTGCCTCAAGCACCGGTTCTCTGCTGACCATGCTTGTGGCAGAGGAGCTTCAGCTTCTTCCTTAGTTTCTGTTGCTAATGATGGTCGGTGGAACAATAGGTTCCTGACTGCTTTGGCTATAAGGACTAGACAAGAATGTGCCAAAAATGGTGCAACTACTTCTAGTTCTCCTAACACTCCTGTTAAGGCCCATTGATCGCAAATTGCTTGATGTGTTATTGATTCTTGAGTGGTTTTATGGCAATGCGATATTGCTTTTCAGTGTAATTAGAATGTTCATGTTTACATTGCATACATGAAATACGATATTGAATAATATGTATTTGGATTTATTTTGATTTAGATATTTATGTTCTAGCACACATTAACAAGGTTTTAAATTTTGC 815 0.4123 MASGGTEALPDLGKHCQHRHCNQLDFLPFTCDGCKQVFCLEHRSYKSHACPKSDHNSRKVVVCETCNMSIETTGHLEQDEEAILQQHHKSGHCDPTKKKKPICPVKRCKEVLTFSNTSTCKTCHIKVCLKHRFSADHACGRGASASSLVSVANDGRWNNRFLTALAIRTRQECAKNGATTSSSPNTPVKAH 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00409 191 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Pste9g00409 191 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Pste9g00409 191 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Pste9g00409 191 Pfam AN1-like Zinc finger 103 140 IPR000058 GO:0008270
Pste9g00409 191 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Pste9g00409 191 SUPERFAMILY AN1-like Zinc finger 6 58 IPR035896 -
Pste9g00409 191 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Pste9g00409 191 FunFam AN1-type zinc finger protein 2B isoform X1 6 67 - -
Pste9g00409 191 Gene3D - 2 66 IPR035896 -
Pste9g00409 191 Gene3D - 77 153 IPR035896 -
Pste9g00409 191 SUPERFAMILY AN1-like Zinc finger 95 145 IPR035896 -
Pste9g00409 191 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 8 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00409 Pste-Chr9 1963346 1964611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00409 1 173 C2H2 Transcription Factor Family AT3G28210 60.694 3.50e-77 227