Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00395 TTTGCATTTACCGCCAAACGCTAGCTTTCTCAGCACTCTGAAGTGCAATGGAAGAAGACGAAGAACGCTTTCAATTTCCTCATCAATCTCAAGGTTCTCCGGTTCCAGGCTTCGAACGAGTGGTGGCAACGGTTAGCGGCTACCGCGGAACTGAGCGATTCAATCTCATCAAGCTGATTACACACGCTGGCGGCAATTATGTTGGCTCAATGTTAAAATCGATAACGCATCTGGTGTGCTGGAAATTTGAAGGAAAGAAATATGATATTGCGCGAAAGTTTAGAATACCTGTGGTTAACCACCAATGGATTGAAGATTGCATAAAGGAAGGAAGGTGTGTTCCGGAAGATTCTTATACCTTGCAAAGTGGACATGAAGTTGGGCCATCGTTACTGGAGGTTCCCCTCATTGTTCAAGCCAGTAGCTTGACAAAGAGAAAATTGGTCAGTGACAACTTACATGATACTGGGTCTGAGAGGCAAAAGACCAACTCTGGTTCTGGAGCTTCCGGAACTTATGTTTTGGAAGATTCTTGTTTAATGAAACAGCTTCAGGAGTCAAGTTCATATTCTTCTAGACTGTCAAAGAAAGGAAAAAGGAATATTTGCAATGCTAAGGGAGTCGGTACGGAGGTTGGACCTTCTCGCAAAGGAAGAAGACTTGCAAGGAATCTTGTTGATAAGGTTTTGTTGGATCCTTCAATTGTGGATTTAGGCCAAGATGACCAACTTTTTAGAATGGATAGACTGGAAACTAGTGCTGCAGCTACCTCAAGCCTTTCTGGTTGTGTCAGCAATAACATTATTCTGCAACATAGTGAAGGACATAATGCTGGATTAAGTAATCAAAGTAGAACTTTGAATGTTGGCTCAGATGATATTGAACAGATCAAAGATTCAAATTATATATCTACACCTACAAATTCAACACTGTTTATAGAAGATCCCCTACATATGCCTCAAGCATCAATAGATTTATGTTCTAGTGAGGATGAAAAATTCGCAGCTGGCTATCAGGTTGATAATGTTTCTGGATTACCTTCTTCAACAGAGATGTCCTGTGTTATATGTTTCACAGATTTCAGTTCAACACGGGGGATTCTTCCCTGCGGACATCGATTTTGTTTTCCATGCATCCAGAGTTGGGTTGATCATAGGACTTCAATGCAAAAACCATCAACCTGCCCTTTGTGCAAGGCAAGTTTTGTGATGATTAGGAAAGTTGAGCATGCAGCCACAGCTGATCAAAAAGTATATTCCCAAACAATCCCATGTGATGATTCAGCCTCAGTTATTTTCATCCCTGCGGATAATATATTACCAAATAATATCTTTGAGTCTGCACAGGCATATGCTTGTGTAATTTGCCATGGTAGGGAACCAGAGGATCTCCTTGAGAATTGTGATGTTTGCCATTTTCGAAGGATCCATTCCTATTGCATGGACCCTCCTCTAAGGCCATGGATATGCTGTCCCTGCAAGGAACTTCGGATGCGTTATCGCAGTAATAACTCTTATTATTAGAGCGTATCTTTTATCCCATGCAACTCTTTGGAATCCCAAGTATGTCCAAACTCAGAACATCATCTGATGAAATTCATTGTAATTTTGTGGAGCTTTTTATGTAGCAATTCTTAATTGAAACTCAGTTACATTCTTAACTTAGATCTCAATAATTTAACTATGAAAATTCTCAATTGTGGATTGGAAAACAAAGCCTTGGTAGGTTAACATGCGGCATTATGTTGGAAAATATAGTTATAACCATGGGT 1771 0.402 MEEDEERFQFPHQSQGSPVPGFERVVATVSGYRGTERFNLIKLITHAGGNYVGSMLKSITHLVCWKFEGKKYDIARKFRIPVVNHQWIEDCIKEGRCVPEDSYTLQSGHEVGPSLLEVPLIVQASSLTKRKLVSDNLHDTGSERQKTNSGSGASGTYVLEDSCLMKQLQESSSYSSRLSKKGKRNICNAKGVGTEVGPSRKGRRLARNLVDKVLLDPSIVDLGQDDQLFRMDRLETSAAATSSLSGCVSNNIILQHSEGHNAGLSNQSRTLNVGSDDIEQIKDSNYISTPTNSTLFIEDPLHMPQASIDLCSSEDEKFAAGYQVDNVSGLPSSTEMSCVICFTDFSSTRGILPCGHRFCFPCIQSWVDHRTSMQKPSTCPLCKASFVMIRKVEHAATADQKVYSQTIPCDDSASVIFIPADNILPNNIFESAQAYACVICHGREPEDLLENCDVCHFRRIHSYCMDPPLRPWICCPCKELRMRYRSNNSYY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00395 491 MobiDBLite consensus disorder prediction 134 153 - -
Pste9g00395 491 SUPERFAMILY RING/U-box 333 390 - -
Pste9g00395 491 SUPERFAMILY BRCT domain 17 106 IPR036420 -
Pste9g00395 491 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 426 490 IPR013083 -
Pste9g00395 491 PANTHER F5A8.9 PROTEIN 145 487 - -
Pste9g00395 491 Gene3D BRCT domain 20 104 IPR036420 -
Pste9g00395 491 ProSiteProfiles Zinc finger RING-type profile. 338 383 IPR001841 -
Pste9g00395 491 Pfam Zinc finger, C3HC4 type (RING finger) 338 382 IPR018957 GO:0046872
Pste9g00395 491 Pfam twin BRCT domain 25 87 IPR001357 -
Pste9g00395 491 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 315 416 IPR013083 -
Pste9g00395 491 ProSiteProfiles BRCT domain profile. 17 105 IPR001357 -
Pste9g00395 491 SUPERFAMILY FYVE/PHD zinc finger 433 480 IPR011011 -
Pste9g00395 491 ProSitePatterns Zinc finger RING-type signature. 354 363 IPR017907 -
Pste9g00395 491 SMART BRCT_7 19 95 IPR001357 -
Pste9g00395 491 SMART ring_2 338 382 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00395 Pste-Chr9 1906277 1915341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00395 43 111 Core DNA Replication Machinery Family AT4G02110 40.845 5.78e-13 69.7