Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00347 AACAAAGATCATGTTCATGGGTCATGGTATAGTGGGTGGCCAAATCCATCATCAATTTCGAGCCCCCATAACCCCCACTTCCTCGAGATTCTCACATTCTAAATACTTTTGGTTAAAAAATTTTTGGGTTTGGAACTTTACTGAGTGGCCAAACCCAGGGAATGTTGGATTCTTCATAGCCCCAAGCACATATTATCCACCTTACACATAAGCTAATCAACTTATAGGTTAAGTTTTTTGAGTAATTCAACAAAGCACAAAACTTGTAGCTTGCAATTGCCCATAACTAGGCAAACAGATACTGTCACTAATGAATAAAAAATGAAAGGATTTGGCCATTTTACACCAAAACAAAGGAGAAAAAAAACGTTGTGGTGTTATGTGAATCTGCATAATGTTCACTTATACTAGTAAAATATATGCTCTCTCTCATGGTCCAGTGTGTTTTTTTGGCTTTATTTACTTTGGTGTGAATAAATAATTGTTAAAAGCTCTTTCTGCTTCCTGGGCATGTGCATGATTAACCCACAAGTGAATTTCCCATTCTCTCCTTGACATATTCTCTCCATGCCATGTGTCATTTAAATTTTAACTTCAATTGGTTCATTTTAAGGCCATAACATCACACATTATCTTGTTTAAAACCTGGCTCAATGGCAGGCATGCTATGTTAGTTCCCTTTATATTATCAAAAGCCTGTCTTATTTTCTTTGGTGTCTGACACAAGATTTTGGGTGAATGAGATTCTGGCACTTATTTTGAAAAATCACTGCAGAAGCAAGAACACTCATTTGGGAACTGTTATAGCCTCATTATCTTTATCCTTTAGTACTTCCATCAGGTGTTTCCAGTACTTGTAATTGGTTCTTAGATATTTCAATTGAATGGGGAAGCCAAGAGGAGATGCTGTTCTTTGTTTTGTGATATTTTCCTGGTTTTGGAGCTCTGCCATTGCTTTGCTTTCTCCCAAGGGTGTAAACTTTGAAGTGCAAGCTTTAATGGGCATCAAAGCTTCTCTAGTGGATCCTCATGGCATTCTAGATAATTGGGATGGGGATGCAGTTGATCCATGCAGCTGGAACATGGTCACATGTTCCCCTGAGAATCTTGTTATTAGCCTGGGCATTCCCAGTCAAAATTTGTCTGGCACTCTATCTCCAAGCATAGGAAACCTAACAAATCTTCAGTCTGTGGTGCTACAGAATAATAACATATCTGGACCAATCCCTTCAGAGATAGGAAAACTTTTCAAGCTTCAAACTCTTGATCTCTCTGACAACTTCTTCAATGGGGAAATTCCCCCCTCTTTGAGTCACCTGAGAAGCCTCCAATACTTGAGGCTTAATAATAACAGTTTTGATGGAGAATGCCCAGTGTCACTAGCTAACATGGCACAGCTTGCTTTTCTTGACTTGTCCTACAACAATTTGAGTGGTCCTATACCTGGAATTTTGGCCAAATCATTCAGTATTATAGGAAACCCACTCGTCTGCGCTGCTGAAAAAGGAAAAAATTGCCATGGGATGACACTTATGCCTATGTCAATGAACTTGAACAGTACTGAGGTAAGTGCACTAGTTTTGATAGAAAGTCTCTTTGCTTCGCTAGATGCTTTACCATCAAGCAGAACAAAGGCTCATAAAATGGCCATAGCCTTTGGTTTGAGTTTGGGATGCCTCAGCTTGATTGTTCTAGGTTGTGTACTTGTTCTATGGAGGAGGCACAAGCATAAACAACAGGCATTCTTTGATGTTAATGACCGGCATCATGAAGAAGTCTACCTAGGAAACTTGAAGAGGTTCCATTTAAGAGAACTCCAGATTGCTACTAACAACTTCAGCAACAAAAACATTCTGGGAAAGGGTGGTTTTGGAAATGTCTACAAGGGAATTCTCCCAGATGGCACTCTTGTAGCAGTCAAGAGGCTTAAAGATGGCAATGCTGTTGGGGGAGATATACAATTTCAGACTGAAGTTGAAATGATCAGCTTGGCCGTGCACAGAAACCTCCTCAAACTGTATGGATTTTGCATGACACCAACAGAAAGGCTTTTAGTTTATCCTTACATGTCCAATGGCAGTGTTGCTTCTAGGCTCAAGGGTAAGCCAGTGTTGGATTGGGGCACAAGGAAGCAAATTGCTATAGGAGCAGCAAGGGGACTACTATACCTGCATGAGCAGTGTGATCCAAAGATAATCCACAGAGATGTGAAGGCTGCAAATATATTACTTGATGACTATTGTGAGGCAGTGGTGGGAGATTTTGGGTTGGCAAAGCTATTAGATCACCAAGATTCACATGTCACAACTGCAGTGAGGGGCACAGTGGGGCATATTGCACCAGAGTATCTTTCCACAGGGCAATCTTCAGAGAAGACTGATGTTTTTGGATTTGGCATTCTGCTTCTTGAATTGATCACAGGTCAGAGGGCTCTTGAATTTGGAAAATCAGCCAACCAAAAAGGAGCCATGCTTGATTGGGTAAGGAAACTTCATCAAGAGAAGAAGCTTGAGTTGCTTGTGGACAAGGATCTGAAGAACAACTACGACAGGATTGAGCTTGAAGAAATAGTTCAAGTGGCACTCTTGTCCACACAGTATCTTCCGGGCCACAGGCCCAAAATGTCTGAAGTTGTAAGAATGCTTGAAGGTGATGGGCTTGCAGAGAAATGGGAAGCATCTCAAAGTACTGACACCACCAAATGCAAACCACAAGAACTCTCTTCATCAGATAGGTACTCTGACCTCACTGATGACTCTTCATTGTTAGTCCAAGCCATGGAACTCTCAGGCCCTAGGTGATTTTTTCATACAACATGTTTGGTTTAATGTTAGAAATGTTGTGCATATGTTTCACCAAACATATGTATGCACATCAGAAACCAAACATGCACATAGTTATTCTTAGTTTTTTGTTAATTTATTTTTGTTTCTTATTTGGTTTTTTCTAGTTTCCTAAAGAAAGTATATGAAAGGACATGTGATAATTGAGTCCTGTTATATATGTTGTATGATAGAAGCCTCTTCAAAGTTGAAAAGGGCTTTTTTGTTTTACTTTTTCAAATGTATATATACTTATTTTGTTGAAGATGAGTTTGTAGTGCAAAATTTTGTAAAGTTGAGAGAGAGTGAAAAGCTTTACCTGGTTTTCATTGAAATTAGTAATTAAATTATTTACTTGCC 3182 0.3941 MGKPRGDAVLCFVIFSWFWSSAIALLSPKGVNFEVQALMGIKASLVDPHGILDNWDGDAVDPCSWNMVTCSPENLVISLGIPSQNLSGTLSPSIGNLTNLQSVVLQNNNISGPIPSEIGKLFKLQTLDLSDNFFNGEIPPSLSHLRSLQYLRLNNNSFDGECPVSLANMAQLAFLDLSYNNLSGPIPGILAKSFSIIGNPLVCAAEKGKNCHGMTLMPMSMNLNSTEVSALVLIESLFASLDALPSSRTKAHKMAIAFGLSLGCLSLIVLGCVLVLWRRHKHKQQAFFDVNDRHHEEVYLGNLKRFHLRELQIATNNFSNKNILGKGGFGNVYKGILPDGTLVAVKRLKDGNAVGGDIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANQKGAMLDWVRKLHQEKKLELLVDKDLKNNYDRIELEEIVQVALLSTQYLPGHRPKMSEVVRMLEGDGLAEKWEASQSTDTTKCKPQELSSSDRYSDLTDDSSLLVQAMELSGPR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00347 638 ProSiteProfiles Protein kinase domain profile. 318 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00347 638 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Pste9g00347 638 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Pste9g00347 638 FunFam Somatic embryogenesis receptor-like kinase 1 395 607 - -
Pste9g00347 638 Gene3D Phosphorylase Kinase; domain 1 287 394 - -
Pste9g00347 638 SUPERFAMILY L domain-like 34 321 - -
Pste9g00347 638 MobiDBLite consensus disorder prediction 597 624 - -
Pste9g00347 638 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
Pste9g00347 638 SMART serkin_6 318 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00347 638 SUPERFAMILY Protein kinase-like (PK-like) 295 588 IPR011009 -
Pste9g00347 638 Pfam Protein kinase domain 319 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00347 638 Gene3D Transferase(Phosphotransferase) domain 1 395 607 - -
Pste9g00347 638 MobiDBLite consensus disorder prediction 595 624 - -
Pste9g00347 638 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 21 598 - -
Pste9g00347 638 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Pste9g00347 638 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Pste9g00347 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Pste9g00347 638 FunFam Somatic embryogenesis receptor kinase 1 287 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00347 Pste-Chr9 1657080 1663006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00347 8 638 Receptor kinase-like Gene Family AT5G16000 74.961 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pste9g00347 Pkinase 1.4e-42 CL0016