Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00329 ATGTCGACCCCATTGGCCACAAACTTGCAGCGGGTTCAGGCACTACTCAATGCACCTAATACCATTAATGCATCCAATAAAAGATGGCACTCTGCATTCGTTGCCATCTATTGGGTGGCAACGGCCCTTGAAACCCACCTGGAGTATGGTATCAAAGGTGATGATGGTGATGCTGAAGACTTCACACGTAGAAAGCAAGTGTTTGGTTCCAACACTTACAGCAAGCCACCTTCCAAAGGGTTCTTTCACTTTGTGGTGGAAGCTTTTAAGAATTTCACTATTCTTATCCTTTTGGCTTGTGCTGCGCTTTCCCTTGGGTTTGGGGTCAAGGTGCATGGCCTCAAAGAAGGTTGGTACCACGGGGGAAGCATTATATTCACCCTATTCATTGTTATTTCCGTTTCTTGGGTAAGCAATTTTAGACAGAAGAGACAATTTGAAGAGGTGTTTCAGGTGAGCAACCACATACTGCAGATTGATGTGGTGAGAAGTGGGAGGTGCCAACAAATCTCAATCTTGGAGATCGTGGTTGGTGATGTCATTTGGTTGAAGAGTGGAGATCAAGTGCCAGCAGATGGGTTATTCATAGAAGGACATTCACTTAAAGTTGATGAATCGAGTTTGACAGGAGAGAGTGATCATGTTGAAATTGATAGACAACACCACCCTTTTTTGTCCTCAGGCACCAAGGTGGCTGATGGATATGCCAAGATGCTTGTTACCGCGGTTGGTATGAACACAATATGGGGTCAAATGATGAGTTCAATGAGTCATGATATTGATCAACGAACTCCTTTGCAAGCAAGACTAAACAAGCTTACAGCTTCCATTGAGAAGGATGAGAATGGGGATAGAGATTTCAATGGAGGCAAGACCAAGGTGGATAATATCATAAATGCTATTTTGGGAATTGTTTATGATGCAATAACCAGTGTTGTTGTTGCAATCCCTGAGGGTCTTCCTATGGCTGTGACTTTATCTCTGGCTTATTCAATGAAGAAAATTATGGCTGACAAGGCCGTGGTTAGAAAGCTCTCAGCATGTGAGGCCATGGGTTTTGCCACCACAATATGTACTGATAAGACTGGAACTCTCACACCCAACCAGATGAAAGTTACAACGTTTTGGCATGGCCTTGAACCTGTGGAAGACATTCAAGGTGCTTACTCCAAACCTGATCCGTTTGTTCTTCAACTGATCCAAGAAGGAGTGGCTCTCAACACAACAGGTAGTGTGCAAAAGTCCAATAAATCAGGTTGTGAGTTTGTGTTTCGGTAG 1278 0.4374 MSTPLATNLQRVQALLNAPNTINASNKRWHSAFVAIYWVATALETHLEYGIKGDDGDAEDFTRRKQVFGSNTYSKPPSKGFFHFVVEAFKNFTILILLACAALSLGFGVKVHGLKEGWYHGGSIIFTLFIVISVSWVSNFRQKRQFEEVFQVSNHILQIDVVRSGRCQQISILEIVVGDVIWLKSGDQVPADGLFIEGHSLKVDESSLTGESDHVEIDRQHHPFLSSGTKVADGYAKMLVTAVGMNTIWGQMMSSMSHDIDQRTPLQARLNKLTASIEKDENGDRDFNGGKTKVDNIINAILGIVYDAITSVVVAIPEGLPMAVTLSLAYSMKKIMADKAVVRKLSACEAMGFATTICTDKTGTLTPNQMKVTTFWHGLEPVEDIQGAYSKPDPFVLQLIQEGVALNTTGSVQKSNKSGCEFVFR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00329 425 PANTHER CATION TRANSPORTING ATPASE 39 419 - -
Pste9g00329 425 SUPERFAMILY Calcium ATPase, transduction domain A 160 255 IPR008250 -
Pste9g00329 425 Pfam E1-E2 ATPase 159 275 - -
Pste9g00329 425 Pfam Cation transporter/ATPase, N-terminus 39 104 IPR004014 -
Pste9g00329 425 NCBIfam HAD-IC family P-type ATPase 300 377 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00329 425 Gene3D - 87 354 - -
Pste9g00329 425 FunFam Calcium-transporting ATPase 133 257 - -
Pste9g00329 425 PRINTS P-type cation-transporting ATPase superfamily signature 204 218 - -
Pste9g00329 425 PRINTS P-type cation-transporting ATPase superfamily signature 358 372 - -
Pste9g00329 425 ProSitePatterns E1-E2 ATPases phosphorylation site. 360 366 IPR018303 -
Pste9g00329 425 Gene3D - 59 257 - -
Pste9g00329 425 Gene3D - 355 367 IPR023214 -
Pste9g00329 425 Gene3D - 368 378 IPR023299 GO:0000166
Pste9g00329 425 SUPERFAMILY Calcium ATPase, transmembrane domain M 38 352 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00329 Pste-Chr9 1550413 1551949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00329 39 424 Primary Pumps ATPases AT3G22910 58.435 5.25e-146 439