Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00324 TTTGCAACTTCCTGGGCAGTGGATACACGATTCAGCCTCAAAACTCAACTTTCATCTTTATTGAACGATTCAAGTTGTAAAGAGGGAGACTGGGATGACATCTTTCTTAACAAGTGCTGTGAAAAAGCATTTGATGCTTATCTCTACGCACTCGGCTGGCAGGCAAATCAAACAGGGAAGATTTACTTGGATTCTACTGAGGAAAGAAATTGTTTTTCTAGAATAAAGACTTTTAATGATGATATTTTTGGCTGTGGAATTGAGAACCTGACAAGTGGTGTTGGTGGATGTTCTGACTTCTTGGTTGCTGATGTTAGGAATAAATTGGGAAATGAGCTTAGAAGTTTAGATGATAACTGTCAACTTCAAACTTCTGTGAATGACTGGGAACAATCATGTTCTTTGTGCATGGGGGCATGGAAAACTATAGGAGGCGAAGATTTCAGAAAGGCCAATATCAAAGCTGAAAAAATTGAAGCTCATCACTGTAGAATTGCTGTACTTGTGACATTGATAAGCAGCAAAATTGAAAATGTGATGTATGTCAAAACAGTTCTGAGATGCCTTGGAGCAAAACATATTTATTCAGTAGAAAATCAAATCATAGAAGGCAATAATCAGAAAATGAAGAGTAACAGAGTCCCATTCGGAGACATGTTAAGGAAAACTGCCTGTCCCAGAGTTCCTATCAAGGAAGTATATGCCGCCACTAACCATCTGAATGAAATGAATATCATCGGGAAAGGAACTGCAGGTAAGGTCTATAAGGGTACAACGACAAATAATCAGTATGTCGCAATAAAGCACATTATCAATGATGATGGAAATGTGGACACTTTTGTCAGAGAAGTTACATGCTTATCTCATGTCAGACACCCTAATCTTGTTGCTTTGCTGGGTTGCTGTGTTGAGGGAGATGAATGTTTTCTGGTTTATGAACTATGTCCCAATGGGAGCCTTTCAGAATGGCTATTTGGCAAGGATAAGGTGCTGTCATGGATACAAAGGCTACACATTGCAATTGATAGTGCTCGAGGTCTTTGGTTCCTACATACATATCAAGGAGGATGCATTGTTCACCGCGATATCAAGCCAACAAATATTCTTCTGGGGTCCAAATTTGAGGCAAAGCTATCAGACTTTGGACTGTCTAAAGTTATTGAGGTCGGTGAACCGAATGTTAGCTCTGAAGTGAGAGGAACATTTGGATATGTTGATCCTGAGTACCAAAGCAATCACCATGTGAATTCATCTGGTGATGTTTACAGCTTTGGCATGGTACTTCTACAAATCCTCTCGGGAAAGAAGGTTATCAATTTGAAACTGAAGAATCCAATGTCACTGAACAAAGTGGCAAAAGCACTCACCAGGGATGGTAGCATAACAGGATTTGCTGACCCTAAACTTCAAGGGGAGTATTCTGAAGAAGCATTTGATTTTACACTTAAGCTAGCTCTATCATGTACAGCCCTTAACCAACAACGTCCTTGCATGGGGCAGGTTGTCAAAAGACTAGAAGAGGCTCTACTCATTTCAAAAGGGAGGAAGGCATCTACTATAGAATCTCCAGAAGACAATATTTCTAATCCATGA 1593 0.3986 FATSWAVDTRFSLKTQLSSLLNDSSCKEGDWDDIFLNKCCEKAFDAYLYALGWQANQTGKIYLDSTEERNCFSRIKTFNDDIFGCGIENLTSGVGGCSDFLVADVRNKLGNELRSLDDNCQLQTSVNDWEQSCSLCMGAWKTIGGEDFRKANIKAEKIEAHHCRIAVLVTLISSKIENVMYVKTVLRCLGAKHIYSVENQIIEGNNQKMKSNRVPFGDMLRKTACPRVPIKEVYAATNHLNEMNIIGKGTAGKVYKGTTTNNQYVAIKHIINDDGNVDTFVREVTCLSHVRHPNLVALLGCCVEGDECFLVYELCPNGSLSEWLFGKDKVLSWIQRLHIAIDSARGLWFLHTYQGGCIVHRDIKPTNILLGSKFEAKLSDFGLSKVIEVGEPNVSSEVRGTFGYVDPEYQSNHHVNSSGDVYSFGMVLLQILSGKKVINLKLKNPMSLNKVAKALTRDGSITGFADPKLQGEYSEEAFDFTLKLALSCTALNQQRPCMGQVVKRLEEALLISKGRKASTIESPEDNISNP 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00324 530 FunFam probable receptor-like protein kinase At5g59700 315 522 - -
Pste9g00324 530 Gene3D Phosphorylase Kinase; domain 1 200 314 - -
Pste9g00324 530 SUPERFAMILY Protein kinase-like (PK-like) 222 506 IPR011009 -
Pste9g00324 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Pste9g00324 530 Pfam Protein kinase domain 242 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00324 530 Gene3D Transferase(Phosphotransferase) domain 1 315 522 - -
Pste9g00324 530 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 127 507 - -
Pste9g00324 530 Pfam SPARK 23 145 IPR043891 -
Pste9g00324 530 ProSiteProfiles Protein kinase domain profile. 240 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste9g00324 530 SMART serkin_6 240 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00324 Pste-Chr9 1522011 1524768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00324 230 506 Receptor kinase-like Gene Family AT1G07650 41.404 4.98e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Pste9g00324 Pkinase 3.3e-42 CL0016