Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00322 ATGTCAACGCCATTGCTTACAAACTTGCAGCGGGTTCAGGCACTACTCAATGCACCTAATACCATTAATGCATCCAATAAAAGATGGCACTCTGCATTCATTGCCATCTATTGTTCTCGAGCAATTATGTCACACTTCACTCTTAACAAAACAAACAAAACCAAAGCAAAAGCCTCACCTATACCAACACCAACACCATCTTTCACTGTTGTTGATTTGATCCCTCAACATTCTTTTGATATAGACCAAACAACCCTCACTGATATTGTCAAAGAAAAAGACCTACACAACCTTGATAAACTTGGTGGGGTTGAAGGGGTGGCAACAGCCCTTGAAACCCACGTGGAGTATGGTATCAAAGGTGCTGATGATGATGCTGAAGACATCACACGTAGAAAACACGTGTTTGGTTCCAACACTTACAGCAAGCCACCTTCCAAAGGGTTCTTTCATTTTGTGGTGGAAGCCGTTAAGGATGTCACTATTCTTATCCTTTTGGTTTGTGCTGCTCTTTCCCTTGGCTTTGGCATCAAGGAGCATGGCATCAAAGAAGGTTGGTACGATGGTGGAAGCATCTTTGTTGCCGTGTTTATTGTCATTTCTTTGTCATCAATAAGTAACTTCAGGCAGAACAGACAATTTGACAAGTTGTCTCAAGTGAGCAATGACATACAAATTGATGTGGTGAGAAGTGGTAGGCGCCAAAATATCTCAATCTTTGAGATCGTGGTTGGTGATGTCATTTGCTTGAAGATTGAGATCAAGTGCCCGCAGATGGGCACCAAGGTGGCTGATGGATATGCCAAGATGCTTGTTACCTCAGTTGGTATGAACACAACATGGGGCCAAATGATGAGTTCAATAAGTAGAGATATCAATGAGCAAACTCCATTGCAAGAGAGGCTAAACAAGCTTACATCATCCATTGGAAAGGTTGGTTTGGCTGTGGCTTTTCTTGTCCTTGTTGTTTTGTTAGTTAGGTACTTCACCGGAAACACAAAGAATGAGAAAGAAGCTAGAGAGTTCAATGGAAGCAAGACCAAATTTGATGATATAATGAATGCTGTTGTGGGAATTGTTGCTGATGCAGTTACCATTGTTGTTGTTGCAATCCCTGAGGGTCTTCCACTTGCTGTCACCCTTACCCTGGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGATGAAAGTGACCAAGTTTTGGCTTGGTTTAGAACCTGTTCTAGAAAGTGCCTACACAAATGTTACTCCATTTGTTCTTCAACTGATAAAAGAAGGAGTGGCTCTCAACACAACAGGTAGTGTGCAAAAGTCCAATAAATCAGGTTGTGAATTTGAGTTTTCAGGTAGTCCCACAGAGAAAGCAATCCTATCATGGGCAGTTTCGGAATTGAACATGGAGATGGAGAACTTGACAAGAAGCTGTTCTATCATTCATGTTGAAACATTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAGAAGAAATGCAGACAACACAATTAATGCACACTGGAAGGGAGCAGCTGAGATGGTACTAAAGATGTGTTCAAGATACTATGATGCTTCTGGCATTGTGAAAAATCTTGACAGTGACAGCATGATGAAGTTTGAACACATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATTGCTTTTGCCCATGTAGAAGTAGCCGAGGAAGAGGTTGGATATGAAGAAGGCAACACAATGGTGAAAGTGAAAGAGAATGGTTTAACATTGTTAGGATTTGTGGGGATTAAGGATCCATGCCGTCCAGAGGTGAAGAGTGCTGTGGAAGCTTGCCAACATGCCGGTGTGAATGTAAAAATGATCACTGGTGACAATGTTTTCACTGCAAAGGCCATAGCAACTGAATGTGGCATACTTCGGCCTAATCAGGACACAATTGGAGCAGTGATTGAAGGAGAGGAATTTCGAAACTACACACCTGAAGAGAGATTGGAGAAGGTGGACAAAATCTGTGTGATGGCAAGATCTTCTCCTTTTGACAAACTTATAATGGTTCAATGCCTGAAGCAGAAAGGCCATGTGGTTGCTGTCACTGGAGATGGAACAAATGATGCACCAGCACTCAAGGAAGCTGATATTGGACTCTCTATGGGAATTCAAGGTACTGAAGTGGCGAAAGAGAGCTCAGATATTGTTATATTGGATGACAATTTTGCATCTGTGGTCACTGTCTTAAGCACTTGCAATCAACTTCGTGGCAGCAGTATCAGCTGGGAAGTGCCACTCACAGCAGTACAATTATTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCTCTTGCAACAGAAAAGCCTACCATGGAGCTGATGGATCAACCACCAGTAGGTAGAACAAAACCTCTCATCACTAATGTCATGTGGAGGAATCTATTGGCTCAAGCTTTGTACCAAATAGCAGTTTTGCTGACCCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTTACATCTGGGGTTAATGACACATTGATTTTCAACACATTTGTTCTATGCCAAGTCTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAGGAATGTTTTCAAAGGCATACACAAGAGCAAGTTGTTTTTGGGCATTATTGGCATAACAATAATCCTTCAGGTGGTGATGGTTGAGTTTCTGAAGAAATTTGCTGATACACAGAGGCTAAATTGGGGGCAATGGGCTATTTGCATTGGTCTAGCTGCTATTTCCTGGCCAATTGGTTGGGTTGTGAAGTTGATACCTGTCCCAGAGAAACCATTGCTCGATATTTTGAGAATGAAAAAATGA 2823 0.4173 MSTPLLTNLQRVQALLNAPNTINASNKRWHSAFIAIYCSRAIMSHFTLNKTNKTKAKASPIPTPTPSFTVVDLIPQHSFDIDQTTLTDIVKEKDLHNLDKLGGVEGVATALETHVEYGIKGADDDAEDITRRKHVFGSNTYSKPPSKGFFHFVVEAVKDVTILILLVCAALSLGFGIKEHGIKEGWYDGGSIFVAVFIVISLSSISNFRQNRQFDKLSQVSNDIQIDVVRSGRRQNISIFEIVVGDVICLKIEIKCPQMGTKVADGYAKMLVTSVGMNTTWGQMMSSISRDINEQTPLQERLNKLTSSIGKVGLAVAFLVLVVLLVRYFTGNTKNEKEAREFNGSKTKFDDIMNAVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMMKVTKFWLGLEPVLESAYTNVTPFVLQLIKEGVALNTTGSVQKSNKSGCEFEFSGSPTEKAILSWAVSELNMEMENLTRSCSIIHVETFNSKKKRSGVLLRRNADNTINAHWKGAAEMVLKMCSRYYDASGIVKNLDSDSMMKFEHIIQGMAASSLRCIAFAHVEVAEEEVGYEEGNTMVKVKENGLTLLGFVGIKDPCRPEVKSAVEACQHAGVNVKMITGDNVFTAKAIATECGILRPNQDTIGAVIEGEEFRNYTPEERLEKVDKICVMARSSPFDKLIMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLSTCNQLRGSSISWEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDQPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKRNVFKGIHKSKLFLGIIGITIILQVVMVEFLKKFADTQRLNWGQWAICIGLAAISWPIGWVVKLIPVPEKPLLDILRMKK 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00322 940 Gene3D - 152 401 - -
Pste9g00322 940 PRINTS H+-transporting ATPase (proton pump) signature 725 750 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00322 940 PRINTS H+-transporting ATPase (proton pump) signature 693 709 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00322 940 PRINTS H+-transporting ATPase (proton pump) signature 540 558 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00322 940 SUPERFAMILY Calcium ATPase, transmembrane domain M 745 927 IPR023298 -
Pste9g00322 940 PANTHER CATION TRANSPORTING ATPASE 259 742 - -
Pste9g00322 940 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 396 599 IPR023299 GO:0000166
Pste9g00322 940 Gene3D - 428 594 IPR023299 GO:0000166
Pste9g00322 940 SUPERFAMILY HAD-like 580 740 IPR036412 -
Pste9g00322 940 FunFam Calcium-transporting ATPase 395 594 - -
Pste9g00322 940 Gene3D - 743 929 - -
Pste9g00322 940 Pfam Cation transport ATPase (P-type) 436 521 - -
Pste9g00322 940 Gene3D - 595 738 IPR023214 -
Pste9g00322 940 FunFam Calcium-transporting ATPase 589 738 - -
Pste9g00322 940 NCBIfam HAD-IC family P-type ATPase 666 746 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00322 940 Pfam Cation transporting ATPase, C-terminus 755 925 IPR006068 -
Pste9g00322 940 Pfam haloacid dehalogenase-like hydrolase 558 707 - -
Pste9g00322 940 Pfam Cation transporter/ATPase, N-terminus 101 172 IPR004014 -
Pste9g00322 940 SUPERFAMILY Calcium ATPase, transduction domain A 225 287 IPR008250 -
Pste9g00322 940 SUPERFAMILY Calcium ATPase, transmembrane domain M 102 398 IPR023298 -
Pste9g00322 940 PRINTS P-type cation-transporting ATPase superfamily signature 587 598 - -
Pste9g00322 940 PRINTS P-type cation-transporting ATPase superfamily signature 693 712 - -
Pste9g00322 940 PRINTS P-type cation-transporting ATPase superfamily signature 717 729 - -
Pste9g00322 940 PRINTS P-type cation-transporting ATPase superfamily signature 609 619 - -
Pste9g00322 940 SMART Cation_ATPase_N_a_2 94 177 IPR004014 -
Pste9g00322 940 Pfam E1-E2 ATPase 259 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00322 Pste-Chr9 1513382 1516459 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00322 12 940 Primary Pumps ATPases AT3G22910 59.941 0.0 1095