Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00319 ATGTCAAAGTCCTTTTCCCCAGACTTGCTGTTCTTTGAGAAAGTAGTACTCAAAGCATCAAACACCAAAACAGCCTCCAAACAAAGATGGCACTTTGCATTCGTGACCATCTATTGTTCTCGAGCTATCATGTCATTCTCCACTCTCAACAAAACACACAAAACCAAAGCAAAAGCCTCACCTACACCAACAACGACTCCAAGTTTCACAGTTATTGATTTGACGTTTTTGAACCCTCAGCATCATTCCTTTGCTATTGATAAAACAAGCCTCACCAATATTGCCATAGAAAGAGACCTTCAGAAGCTTGTTATACTTGGTGGGGTTCAAGGGGTGGCTTCAATCCTTGAAACCAACGTTGAGTATGGTATCGAAGGTGATGCTGATGCTGCTGCTGCTGAAGACATCACACGTAGAAAACAAGTGTTTGGTTCCAACACCTACTGGAAACCTTCCAAAGGGTTCTTTCATTTTGTGGGGCAAGCATTTAAGAATGTCCCTATTTTTATCCTTTTGGTTTTTGCTGCGGCTTCCCTTGTGTGTGGCATCGCGGTGGATGGCATCAAACAAGGTTGGTACAACGGTGGAAGCTATTTTCTTGCGGTGTTCATTGTCATTTCATTGTCATCAATAAGCAACTTCAGACAGAACAAGCAAGTTGGCAAGCTGTTTCAAAGGATCAATGACAAACAAATTGATGTGGTAAGAAGTGGGAGGCGCCAACATGTACCAATCACAGAAATCGTGGTCGGTGATGTCATTTGGTTGAAGAATGGAGATCAAGTGCCAGCAGATGGGATATTAATAGAAGGACATTCACTTAAAGTTGTTGAATATTCAAGAATGATAGGTTGTATTGATGTTACTAGAGAGCAACACCCTTTTCTCTACTCAGGCAACTATGTAGTTGATGGGTATGCAAAGATGCTTGTTACCTCAGTTGGTATGAACACAAAATTGGGCCAAAGGATGAGCTCAAGAAGTCATCATATTCAAGAGAAAACTCCTTTGCAGAAGAGGCTAGTCATGCTTGGTTTGGCTGTGAATATTGTTGTCCTTATTGTTTTGTCAGTTGGTCACCTCGCGAGGGCCTCAAATGATGAGAAGGTTAGAGATTCCAATGGAAGCAGGAGCAAGTTCGATGACATAGTGAAAACTGTTTTAGGAATTGTTTCTGATGCGGTTACCATTGTTGGTTTTACACTCCCTGAGGTTCTTCCACTGGCTGTGACTCTCACCCTGGCTTATTCAATGAAGAGAATGATGACTGACCAAGCAATGGTGAAAAATCACTCTGTATGTGAGAAAATGGGTTCTGTCACTACAATTTGTACTGATAAGACAGGAACTCTCACATTCAACCAGATGAAAGTGACCAAGTTTTGGCTTGGCCTAGAACCTGTGCTAGAAAGTGCCTACACCAGTGTTGCTTCATCTGTTCTGCAATTGCTCCAAGAAGGAGTGGCTCTCAACACTGATGGTACTGTGCAAAAGTCCAATAACTCAAGTTCTGAATTTGAATTTTCTGGTAGTCCCACAGAAAAAGCAATCCTATCTTGGGGTGTCCAAGAATTGAACATGGAGATGGAGCAGTTGACGAGAAATTGTTCCATCATTCATGTTGAGACCTTCAACTCAGAGAAGAAACGAAGTGGAGTTTTGTTGAGAAGGAAGGCAGACAACACAGCTAATGCACACTGGAAAGGAGCAGCTGAGATGGTACTAAAGATGTGCTCAAGATACTATGATGCTTCTGGAATTGTGCAAGATCTTGACGAAGACAGCATCTTGAGATTTGAACACATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATTGCTTTTGCACATGTACAGGTAGCTGAAGAAGAACTTGGAGGAGATGAACAAGGCAATATAATGGTGAAAGATAATGGTCTAACCTTGTTAGGACTTGCGGGTATCAAGGATCCGTGTTGTCCAAAGGTTAAGCAAGAAGTGGAAGCTTGCCAACATGCCGGTGTGAATGTCAAAATGGTCACTGGTGACAATGTTTTCACTGCAAAGGCCATAGCAATTGAATGTGGCATACTTCAGCCAAATCAGGACATAATTGGAGCAGTGATTGAAGGAGAGGAATTTCGAAACTACACACCTGAAGAGAGATTGGAGAAGGTGGACAAAATTTGTGTGATGGCAAGATCTTCTCCTTCTGACAAACTTCTAATGGTTCAATGCCTGAAGCAGAAAGGCCATGTAGTTGCTGTCACTGGAGATAGCACAAATGATGAAGCAACACTCGTAGAAGCTGATATTGGACTCTCTATGGGAATCCAAGGTACTGAAGTGGCCAAAGAGAGCTCAGATATTGTTATATTGAATGACAATTTTGCATCTGTTGTCACGGTCTTAAAGTGGGGTAGATGTGTTGATAACAGCATCCAGAAGTTCATCCAGTTTAAATTCACAGTGACTGTAGCAGCACTTGCAATCAACTTTGTGGCAGCAGTATCAGCTGGGAAAGAGCCACTAACAGCAGTACAATTATTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCTCTTGCAACAGAAAAGCCTACCATGGAGCTGATGGATCAACCACCAGTAGGTAGAACAAAACCTCTCATCACTAATGTCATGTGGAGGAATCTATTGGCTCAAGCTCTGTACCAAATTGCAGTTTTGCTGACTCTTCTATTGAAAGGTGAGTCTATCTTTGGTGTGACATCTGGGGTTAATGACACATTGGTTTTCAACACATTTGTTCTTTGTAATGTGTTCAACGAGTTCAATGCAAGGGATATAAATAAGAAGAATGTGTTCAAAGGCATACACAGGAGCAAGTTGTTTTTGGGCATTATTGTTATAACAATAATCCTTCAGGTGATGATGGTTGAGTTTCTCAATAAATTTGCTGACGCAGAGAGGCTAAATTGGATGCAATGGGTTATATGCATTGGTCTAGCTTCAGTTACCTTACCAATTGGTTGGGTTGGGAAGTTGATACCTGTCCCAGTAAAACATTGCTCAATTTTTGAGTATGAACTATGA 3063 0.4163 MSKSFSPDLLFFEKVVLKASNTKTASKQRWHFAFVTIYCSRAIMSFSTLNKTHKTKAKASPTPTTTPSFTVIDLTFLNPQHHSFAIDKTSLTNIAIERDLQKLVILGGVQGVASILETNVEYGIEGDADAAAAEDITRRKQVFGSNTYWKPSKGFFHFVGQAFKNVPIFILLVFAAASLVCGIAVDGIKQGWYNGGSYFLAVFIVISLSSISNFRQNKQVGKLFQRINDKQIDVVRSGRRQHVPITEIVVGDVIWLKNGDQVPADGILIEGHSLKVVEYSRMIGCIDVTREQHPFLYSGNYVVDGYAKMLVTSVGMNTKLGQRMSSRSHHIQEKTPLQKRLVMLGLAVNIVVLIVLSVGHLARASNDEKVRDSNGSRSKFDDIVKTVLGIVSDAVTIVGFTLPEVLPLAVTLTLAYSMKRMMTDQAMVKNHSVCEKMGSVTTICTDKTGTLTFNQMKVTKFWLGLEPVLESAYTSVASSVLQLLQEGVALNTDGTVQKSNNSSSEFEFSGSPTEKAILSWGVQELNMEMEQLTRNCSIIHVETFNSEKKRSGVLLRRKADNTANAHWKGAAEMVLKMCSRYYDASGIVQDLDEDSILRFEHIIQGMAASSLRCIAFAHVQVAEEELGGDEQGNIMVKDNGLTLLGLAGIKDPCCPKVKQEVEACQHAGVNVKMVTGDNVFTAKAIAIECGILQPNQDIIGAVIEGEEFRNYTPEERLEKVDKICVMARSSPSDKLLMVQCLKQKGHVVAVTGDSTNDEATLVEADIGLSMGIQGTEVAKESSDIVILNDNFASVVTVLKWGRCVDNSIQKFIQFKFTVTVAALAINFVAAVSAGKEPLTAVQLLWVNLIMDTLGALALATEKPTMELMDQPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLLLKGESIFGVTSGVNDTLVFNTFVLCNVFNEFNARDINKKNVFKGIHRSKLFLGIIVITIILQVMMVEFLNKFADAERLNWMQWVICIGLASVTLPIGWVGKLIPVPVKHCSIFEYEL 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00319 1020 SUPERFAMILY HAD-like 442 856 IPR036412 -
Pste9g00319 1020 SFLD p-type atpase 426 804 IPR044492 -
Pste9g00319 1020 Gene3D - 441 796 IPR023214 -
Pste9g00319 1020 Pfam Cation transporting ATPase, C-terminus 836 1006 IPR006068 -
Pste9g00319 1020 Pfam haloacid dehalogenase-like hydrolase 440 765 - -
Pste9g00319 1020 NCBIfam HAD-IC family P-type ATPase 724 831 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00319 1020 ProSitePatterns E1-E2 ATPases phosphorylation site. 446 452 IPR018303 -
Pste9g00319 1020 SUPERFAMILY Calcium ATPase, transduction domain A 230 324 IPR008250 -
Pste9g00319 1020 SUPERFAMILY Calcium ATPase, transmembrane domain M 107 1008 IPR023298 -
Pste9g00319 1020 Gene3D - 134 328 - -
Pste9g00319 1020 PANTHER CATION TRANSPORTING ATPASE 64 1008 - -
Pste9g00319 1020 FunFam Plasma membrane calcium-transporting ATPase 2 651 796 - -
Pste9g00319 1020 FunFam Calcium-transporting ATPase 768 1010 - -
Pste9g00319 1020 FunFam Calcium-transporting ATPase 454 652 - -
Pste9g00319 1020 NCBIfam calcium-translocating P-type ATPase, PMCA-type 98 1008 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pste9g00319 1020 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Pste9g00319 1020 PRINTS P-type cation-transporting ATPase superfamily signature 444 458 - -
Pste9g00319 1020 PRINTS P-type cation-transporting ATPase superfamily signature 645 656 - -
Pste9g00319 1020 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Pste9g00319 1020 PRINTS P-type cation-transporting ATPase superfamily signature 667 677 - -
Pste9g00319 1020 Gene3D - 454 652 IPR023299 GO:0000166
Pste9g00319 1020 Pfam Cation transporter/ATPase, N-terminus 107 177 IPR004014 -
Pste9g00319 1020 Pfam E1-E2 ATPase 228 422 - -
Pste9g00319 1020 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00319 1020 PRINTS H+-transporting ATPase (proton pump) signature 599 617 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00319 1020 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00319 1020 Gene3D - 161 1004 - -
Pste9g00319 1020 SFLD Haloacid Dehalogenase 426 804 - -
Pste9g00319 1020 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 450 656 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00319 Pste-Chr9 1505155 1508217 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00319 26 1008 Primary Pumps ATPases AT3G63380 58.109 0.0 1072