Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00315 TTCATTGTCTTCTTCGTATATATCTTCAAACTTTGCATGCATTGTACTAGAAACTATGTCAATGCCTTTGCTCACAAATATGCAGCGCACCAAGGTGCTACTCACCGCACCAAAAACTGTTAGTGTATATAACAAAACTGGCATTATGCATTCATGGCTATCTATTGTTCCCGAGCTATTATGTCATACTCCACTCTCAACAAAACAAACAAAACTAAAAAAGCAAAAGCCTCACCTAAACCAACACCAACACCATCTTTCACAAAAAGACCAACATAACCTTGATAAACTTGGTGGGGTTGAAGGGGTTGCAACAGCCCTTGAAACCCACTTGGAATATGGTATCAAAGGTGGTGATGATGATACTGATGAGATCACACGTAGAAAACAAGTGTTTGGTTCCAACACTCACAGCAAGCCACCTTCCAAAGGGTTCTTTTACTTTGTGGTCGAAGCCTTCAGGGATGTCACTATTCTTATCCTTTTGCTTTGTGCGGCTCTTTCCCTTGGCTTTGGCATCAAGGAGCATGGCATCAAAGAAGGTTGGTACGATGGTGGAAGCATCTTTGTTGCCGTGTTTATTGTCATTTCTTTGTCATCAATAAGTAACTTCAGGCAGAACAGACAATTTGACAAGTTGTCTCAAGTGAGCAATGACATACAAATTGATGTGGTGAGAAGTGGTAAGCGCCAAAATATCTCAATCTTTGAGATCGTGGTTGGTGATGTCATTTGCTTGAAGATTGGAGATCAAGTGCCCGCAGATGGGTTATTCATAGAAGGACATTCACTTAAAGTTGATGAATCAAGCATGACAGGAGAGAGTGACCATGTTGAGATTAGTATACAGCACCACCCTTTTTTGTTCTCAGGCACCAAGGTGGCTGATGGATATGCCAAGATGCTTGTTACCTCAGTTGGTATGAACGCAACATGGGGCCAAATGATGAGTTCAATAAGCAGAGATATCAATGAGCAAACTCCATTGCAAGAGAGGCTAAACAAGCTTACATCATCCATTGGAAAGGTTGGTTTGGCTGTGGCTTTTCTTGTCCTTGTTGTTTTGTACTTCACCGGAAACACAAAGAATGAGAAAGGAGCTAGAGAGTTCAATGGAAGCAAGACCAAATTTGATGATATAATGAATGCTGTTGTGGGAATTGTTGCTGATGCAGTTACCATTGTTGTTGTTGCAATCCCTGAGGGTCTTCCACTTGCTGTCACCCTTACCCTGGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGAAAGCTCTCTGCATGTGAGACAATGGGTTCTGCTACCACAATTTGTACTGATAAGACAGGAACTCTCACACTCAACCAGATGAAAGTGACCAAGTTTTGGCTTGGTTTAGAACCTGTTCTAGAAAGTGCCTACACAAATGTTACTCCATTTGTTCTTCAACTGATAAAAGAAGGAGTGGCTCTCAACACAACAGGTAGTGTGCAAAAGTCCAATAAATCAGGTTGTGAATTTGAGTTTTCAGGTAGTCCCACAGAGAAAGCAATTCTATCATGGGCAGTTTCGGAATTGAACATGGAGATGGAGAACTTGACAAGAAGCTGTTCTATCATTCATGTTGAAAGTGGAGTTTTGTTGAGAAGAAATGCAGACAACACAATTAATGCACACTGGAAGGGAGCAGCTGAGATGGTACTAAAGCTGTGTTCAAGATACTATGATGCTTCTGGCATTGTGAAAAATCTTGACAGTAACAACATGATGAAGTTTGAACACATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATTGCTTTTGCCCATGCAGAAGTAGCTGAGGAAGAGGTTGGAGATGAAGAAGGCAGCACAATGGTGAAAAAAGGCCATGTGGTTGCTGTCACTGGAGATGGAACAAATGATGCACCAGCACTCAAGGAAGCTGATATTGGACTCTCTATGGGAATTCAAGGTACTGAAGTGGCGAAAGAGAGCTCAGATATTGTTATATTGGATGACAATTTTGCATCTGTGGTCACTGTCTTAAGGTGGGGAAGATGTGTTTACAACAACATCCAGAAGTTTATTCAGTTTCAACTGACAGTGAATGTGGCAGCACTTGCAATCAACTTCGTGGCAGCAGTATCAGCTGGGGAAGTGCCACTCACAGCAGTACAATTATTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCTCTTGCAACAGAAAAGCCTACCATGGAGCTGATGGATCAACCACCAGTAGGTAGAACAAAACCTCTCATCACTAATGTCATGTGGAGGAATCTATTGGCTCAAGCTTTGTACCAAATAGCAGTTTTGCTGACCCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTAACATCTGGGGTTAATGACACATTGATTTTCAACACATTTGTATTATGCCAAATTTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAGGAATGTGTTCAAAGAGATACACAGGAGCAAGTTGTTTTTAAGCATTATTGGCATAACCATAATTCTTCAAGTGGTGATGGTTGAGTTTCTCAAGAAGTTTGCGGACACAGAGAGGCTAAATTGGGGGCAATGGGCTATTTGCATTGGTCTAGCTGCAATTTCCTGGCCAATTGGTTGGGTTGTGAAGTTGATACCTGTCTCAGAGAAACCATTGCTCAGTTTTTTGCGTATGAAAAAT 2710 0.4144 MSMPLLTNMQRTKVLLTAPKTVSVYNKTGIMHSWLSIVPELLCHTPLSTKQTKLKKQKPHLNQHQHHLSQKDQHNLDKLGGVEGVATALETHLEYGIKGGDDDTDEITRRKQVFGSNTHSKPPSKGFFYFVVEAFRDVTILILLLCAALSLGFGIKEHGIKEGWYDGGSIFVAVFIVISLSSISNFRQNRQFDKLSQVSNDIQIDVVRSGKRQNISIFEIVVGDVICLKIGDQVPADGLFIEGHSLKVDESSMTGESDHVEISIQHHPFLFSGTKVADGYAKMLVTSVGMNATWGQMMSSISRDINEQTPLQERLNKLTSSIGKVGLAVAFLVLVVLYFTGNTKNEKGAREFNGSKTKFDDIMNAVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPVLESAYTNVTPFVLQLIKEGVALNTTGSVQKSNKSGCEFEFSGSPTEKAILSWAVSELNMEMENLTRSCSIIHVESGVLLRRNADNTINAHWKGAAEMVLKLCSRYYDASGIVKNLDSNNMMKFEHIIQGMAASSLRCIAFAHAEVAEEEVGDEEGSTMVKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDQPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLQFKGESIFGVTSGVNDTLIFNTFVLCQIFNEFNARKMEKRNVFKEIHRSKLFLSIIGITIILQVVMVEFLKKFADTERLNWGQWAICIGLAAISWPIGWVVKLIPVSEKPLLSFLRMKN 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00315 885 Pfam E1-E2 ATPase 203 401 - -
Pste9g00315 885 Pfam Cation transporting ATPase, C-terminus 700 870 IPR006068 -
Pste9g00315 885 Gene3D - 133 419 - -
Pste9g00315 885 SUPERFAMILY HAD-like 421 720 IPR036412 -
Pste9g00315 885 SUPERFAMILY Calcium ATPase, transduction domain A 203 300 IPR008250 -
Pste9g00315 885 Gene3D - 420 432 IPR023214 -
Pste9g00315 885 Gene3D - 627 875 - -
Pste9g00315 885 Pfam Cation transporter/ATPase, N-terminus 79 150 IPR004014 -
Pste9g00315 885 SUPERFAMILY Calcium ATPase, transmembrane domain M 80 872 IPR023298 -
Pste9g00315 885 PANTHER CATION TRANSPORTING ATPASE 63 599 - -
Pste9g00315 885 FunFam Calcium-transporting ATPase 175 302 - -
Pste9g00315 885 PRINTS P-type cation-transporting ATPase superfamily signature 639 651 - -
Pste9g00315 885 PRINTS P-type cation-transporting ATPase superfamily signature 615 634 - -
Pste9g00315 885 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Pste9g00315 885 PRINTS P-type cation-transporting ATPase superfamily signature 249 263 - -
Pste9g00315 885 NCBIfam HAD-IC family P-type ATPase 605 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00315 885 NCBIfam HAD-IC family P-type ATPase 366 445 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste9g00315 885 FunFam Calcium-transporting ATPase 632 874 - -
Pste9g00315 885 Gene3D - 433 596 IPR023299 GO:0000166
Pste9g00315 885 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Pste9g00315 885 Gene3D - 104 302 - -
Pste9g00315 885 SMART Cation_ATPase_N_a_2 72 155 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00315 Pste-Chr9 1487528 1490637 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00315 609 884 Primary Pumps ATPases AT3G22910 79.710 1.20e-145 455