Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g00309 GTCTCATCAAGGGCTTCACATTTCACACCTCTCACACCCCAATATCAGGCTTTGTGGCAAATGAGGAAACCTGATATGATGGGAAAAGACAAAATCAACAACAACAATAACAGCAACAACAACAGCAGCATTAAGAGCAAGCTTAGGAAGGGTTTGTGGTCACCCGAGGAGGATGAGAAACTTGTAAGGTACATGATCACTAAGGGACAAGGATGTTGGAGTGACATTGCTAGGAATGCTGGTCTTCAAAGGTGTGGCAAAAGTTGCCGTCTTCGTTGGATTAACTACTTGAGACCTGATCTCAAACGTGGTGCATTTTCCCCTCAAGAGGAAGAACTCATCATTCATTTGCACTCCATTCTGGGAAACAGTGACTCATCAGAGCCAATTAGAGATGTGATGGGTGGGATGATGATGCCCGTGAACGACAATGACCTCATGACCGTGTGCATGGAATCCTCCTCATCCACATCATCATCATCCATGCATGCCAACATGGCCCTAACAACTGACCAATTTGACCCTTTTTATCATCATCATCATCATCCCTTGTTGTCCATGACCGGTGCATCCGGTTTCCTTGACAACATGGCTGCATGCTTAACCCAAGTTGGTATGGTAGATCATGATCATGACCATGATCATGATCATGATCATGGGGTTGTTGTTCATGGTGGTTATGGAACATTGGAGCCTAGTAAAACGGGGTTAGAAAGTGACTTTTTTCTTCCTCCACTAGAAAGTAGAAGCATTGAGGACAATGGTAACACCCCAATTGATGTGAAAACCCATAACAACAACACCAACCACTTCAAGAATAATAGTTATTGCTTCAATAACACTGATCATCATCATCATCATGTTCAAAGCTCAAAAGATGTAGCTGTAGAGGACTTGTTTGAGTTTGCAAATCATGGGCAAGGGGAAAGCTTTAGAATGGGAGAATGGGACTTTGAGGGTTTGATGCAAGACATGTCCTATTTTCCTTCCCTTGATTTCCAAGTTTAA 1008 0.4306 VSSRASHFTPLTPQYQALWQMRKPDMMGKDKINNNNNSNNNSSIKSKLRKGLWSPEEDEKLVRYMITKGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSILGNSDSSEPIRDVMGGMMMPVNDNDLMTVCMESSSSTSSSSMHANMALTTDQFDPFYHHHHHPLLSMTGASGFLDNMAACLTQVGMVDHDHDHDHDHDHGVVVHGGYGTLEPSKTGLESDFFLPPLESRSIEDNGNTPIDVKTHNNNTNHFKNNSYCFNNTDHHHHHVQSSKDVAVEDLFEFANHGQGESFRMGEWDFEGLMQDMSYFPSLDFQV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g00309 335 SUPERFAMILY Homeodomain-like 52 124 IPR009057 -
Pste9g00309 335 MobiDBLite consensus disorder prediction 30 48 - -
Pste9g00309 335 MobiDBLite consensus disorder prediction 26 50 - -
Pste9g00309 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 101 IPR017930 -
Pste9g00309 335 ProSiteProfiles Myb-like domain profile. 45 97 IPR001005 -
Pste9g00309 335 FunFam MYB transcription factor 47 103 - -
Pste9g00309 335 Pfam Myb-like DNA-binding domain 50 97 IPR001005 -
Pste9g00309 335 Gene3D - 50 102 - -
Pste9g00309 335 PANTHER MYB DOMAIN PROTEIN 55 41 124 - -
Pste9g00309 335 SMART sant 49 99 IPR001005 -
Pste9g00309 335 CDD SANT 53 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g00309 Pste-Chr9 1462407 1467012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g00309 21 335 MYB Transcription Factor Family AT3G08500 38.082 1.45e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste9g00309 Myb_DNA-binding 6.8e-13 CL0123